Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HMGCLP35914 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGCLP35914 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGCLP35914 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
HMGCLP35914 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.29■□□□□ 0.36
HMGCLP35914 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HMGCLP35914 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.29■□□□□ 0.36
HMGCLP35914 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HMGCLP35914 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCLP35914 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HMGCLP35914 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLP35914 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLP35914 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLP35914 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCLP35914 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HMGCLP35914 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCLP35914 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HMGCLP35914 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLP35914 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HMGCLP35914 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLP35914 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLP35914 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HMGCLP35914 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.28■□□□□ 0.36
HMGCLP35914 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCLP35914 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCLP35914 FAM197Y8-203ENST00000450145 560 ntBASIC17.28■□□□□ 0.36
HMGCLP35914 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLP35914 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCLP35914 RNPS1P1-201ENST00000507437 918 ntBASIC17.28■□□□□ 0.36
HMGCLP35914 AC073648.2-201ENST00000510116 352 ntBASIC17.28■□□□□ 0.36
HMGCLP35914 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HMGCLP35914 AL160237.2-201ENST00000556165 472 ntBASIC17.28■□□□□ 0.36
HMGCLP35914 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.28■□□□□ 0.36
HMGCLP35914 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCLP35914 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.28■□□□□ 0.36
HMGCLP35914 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCLP35914 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.28■□□□□ 0.36
HMGCLP35914 AC064862.7-201ENST00000604520 867 ntBASIC17.28■□□□□ 0.36
HMGCLP35914 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLP35914 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLP35914 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLP35914 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLP35914 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HMGCLP35914 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLP35914 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMGCLP35914 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.28■□□□□ 0.36
HMGCLP35914 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCLP35914 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.27■□□□□ 0.36
HMGCLP35914 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCLP35914 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCLP35914 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCLP35914 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCLP35914 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
HMGCLP35914 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGCLP35914 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HMGCLP35914 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCLP35914 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.27■□□□□ 0.36
HMGCLP35914 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGCLP35914 AC139887.3-201ENST00000568585 713 ntBASIC17.27■□□□□ 0.36
HMGCLP35914 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGCLP35914 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HMGCLP35914 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.27■□□□□ 0.36
HMGCLP35914 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HMGCLP35914 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCLP35914 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMGCLP35914 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.27■□□□□ 0.36
HMGCLP35914 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
HMGCLP35914 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGCLP35914 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HMGCLP35914 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.27■□□□□ 0.35
HMGCLP35914 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.27■□□□□ 0.35
HMGCLP35914 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGCLP35914 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.27■□□□□ 0.35
HMGCLP35914 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMGCLP35914 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCLP35914 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.26■□□□□ 0.35
HMGCLP35914 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCLP35914 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HMGCLP35914 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
HMGCLP35914 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCLP35914 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMGCLP35914 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.26■□□□□ 0.35
HMGCLP35914 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.26■□□□□ 0.35
HMGCLP35914 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HMGCLP35914 KRT18P67-201ENST00000432816 1264 ntBASIC17.26■□□□□ 0.35
HMGCLP35914 AC018712.1-201ENST00000455767 687 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms