Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 AC005052.1-201ENST00000625181 2492 ntBASIC15.65■□□□□ 0.1
SOX6P35712 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.64■□□□□ 0.09
SOX6P35712 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SOX6P35712 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.64■□□□□ 0.09
SOX6P35712 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.64■□□□□ 0.09
SOX6P35712 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.64■□□□□ 0.09
SOX6P35712 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.64■□□□□ 0.09
SOX6P35712 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.64■□□□□ 0.09
SOX6P35712 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 ABHD17AP1-201ENST00000358206 933 ntBASIC15.64■□□□□ 0.09
SOX6P35712 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SOX6P35712 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
SOX6P35712 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SOX6P35712 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.64■□□□□ 0.09
SOX6P35712 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC15.64■□□□□ 0.09
SOX6P35712 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.64■□□□□ 0.09
SOX6P35712 AC009065.1-201ENST00000564055 1225 ntBASIC15.64■□□□□ 0.09
SOX6P35712 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SOX6P35712 MTDHP1-201ENST00000605323 784 ntBASIC15.64■□□□□ 0.09
SOX6P35712 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.64■□□□□ 0.09
SOX6P35712 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.64■□□□□ 0.09
SOX6P35712 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SOX6P35712 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 REXO1L11P-201ENST00000620964 1927 ntBASIC15.64■□□□□ 0.09
SOX6P35712 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SOX6P35712 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
SOX6P35712 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SOX6P35712 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SOX6P35712 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.64■□□□□ 0.09
SOX6P35712 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SOX6P35712 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SOX6P35712 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SOX6P35712 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
SOX6P35712 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SOX6P35712 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
SOX6P35712 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
SOX6P35712 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.63■□□□□ 0.09
SOX6P35712 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SOX6P35712 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SOX6P35712 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SOX6P35712 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.63■□□□□ 0.09
SOX6P35712 AC239809.2-201ENST00000415381 517 ntBASIC15.63■□□□□ 0.09
SOX6P35712 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SOX6P35712 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC15.63■□□□□ 0.09
SOX6P35712 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SOX6P35712 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.63■□□□□ 0.09
SOX6P35712 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.63■□□□□ 0.09
SOX6P35712 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.63■□□□□ 0.09
SOX6P35712 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SOX6P35712 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.63■□□□□ 0.09
SOX6P35712 CKBP1-201ENST00000565489 1086 ntBASIC15.63■□□□□ 0.09
SOX6P35712 AC233263.1-201ENST00000578059 224 ntBASIC15.63■□□□□ 0.09
SOX6P35712 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.63■□□□□ 0.09
SOX6P35712 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.63■□□□□ 0.09
SOX6P35712 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SOX6P35712 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.63■□□□□ 0.09
SOX6P35712 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SOX6P35712 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.63■□□□□ 0.09
SOX6P35712 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SOX6P35712 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
SOX6P35712 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SOX6P35712 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SOX6P35712 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SOX6P35712 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SOX6P35712 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SOX6P35712 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
SOX6P35712 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SOX6P35712 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.63■□□□□ 0.09
SOX6P35712 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SOX6P35712 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SOX6P35712 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SOX6P35712 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.62■□□□□ 0.09
SOX6P35712 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.62■□□□□ 0.09
SOX6P35712 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.62■□□□□ 0.09
SOX6P35712 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SOX6P35712 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SOX6P35712 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SOX6P35712 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms