Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT9P35527 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT9P35527 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
KRT9P35527 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
KRT9P35527 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT9P35527 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT9P35527 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT9P35527 AC005915.1-201ENST00000624912 2018 ntBASIC19.05■□□□□ 0.64
KRT9P35527 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
KRT9P35527 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.05■□□□□ 0.64
KRT9P35527 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT9P35527 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
KRT9P35527 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT9P35527 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT9P35527 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
KRT9P35527 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT9P35527 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
KRT9P35527 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT9P35527 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT9P35527 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
KRT9P35527 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT9P35527 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT9P35527 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT9P35527 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.04■□□□□ 0.64
KRT9P35527 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.04■□□□□ 0.64
KRT9P35527 AL136038.3-201ENST00000561909 1096 ntBASIC19.04■□□□□ 0.64
KRT9P35527 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.04■□□□□ 0.64
KRT9P35527 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.04■□□□□ 0.64
KRT9P35527 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT9P35527 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.04■□□□□ 0.64
KRT9P35527 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT9P35527 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT9P35527 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
KRT9P35527 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT9P35527 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT9P35527 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT9P35527 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
KRT9P35527 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT9P35527 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT9P35527 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT9P35527 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT9P35527 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT9P35527 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.03■□□□□ 0.64
KRT9P35527 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
KRT9P35527 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT9P35527 AL031133.1-201ENST00000406807 723 ntBASIC19.03■□□□□ 0.64
KRT9P35527 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT9P35527 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT9P35527 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT9P35527 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT9P35527 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
KRT9P35527 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.03■□□□□ 0.64
KRT9P35527 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.03■□□□□ 0.64
KRT9P35527 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.03■□□□□ 0.64
KRT9P35527 AL590326.2-201ENST00000625139 305 ntBASIC19.03■□□□□ 0.64
KRT9P35527 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT9P35527 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT9P35527 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
KRT9P35527 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT9P35527 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
KRT9P35527 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT9P35527 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT9P35527 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.03■□□□□ 0.64
KRT9P35527 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT9P35527 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT9P35527 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KRT9P35527 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KRT9P35527 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.02■□□□□ 0.64
KRT9P35527 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT9P35527 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.02■□□□□ 0.64
KRT9P35527 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT9P35527 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT9P35527 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT9P35527 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.02■□□□□ 0.64
KRT9P35527 MTCL1P1-201ENST00000446207 792 ntBASIC19.02■□□□□ 0.64
KRT9P35527 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KRT9P35527 AC068472.1-201ENST00000474589 881 ntBASIC19.02■□□□□ 0.64
KRT9P35527 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT9P35527 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT9P35527 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT9P35527 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.02■□□□□ 0.64
KRT9P35527 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT9P35527 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
KRT9P35527 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
KRT9P35527 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.02■□□□□ 0.64
KRT9P35527 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
KRT9P35527 LINC02012-201ENST00000608206 1725 ntBASIC19.02■□□□□ 0.63
KRT9P35527 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
KRT9P35527 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
KRT9P35527 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.63
KRT9P35527 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.02■□□□□ 0.63
KRT9P35527 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC19.02■□□□□ 0.63
KRT9P35527 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.01■□□□□ 0.63
KRT9P35527 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT9P35527 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT9P35527 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.01■□□□□ 0.63
KRT9P35527 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT9P35527 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT9P35527 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
KRT9P35527 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms