Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HOXA11P31270 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA11P31270 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA11P31270 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA11P31270 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXA11P31270 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA11P31270 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA11P31270 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA11P31270 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.67■□□□□ 0.58
HOXA11P31270 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXA11P31270 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXA11P31270 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.67■□□□□ 0.58
HOXA11P31270 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
HOXA11P31270 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA11P31270 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
HOXA11P31270 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.67■□□□□ 0.58
HOXA11P31270 HTR5BP-201ENST00000430851 1154 ntBASIC18.67■□□□□ 0.58
HOXA11P31270 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.67■□□□□ 0.58
HOXA11P31270 AC074386.1-202ENST00000463561 864 ntBASIC18.67■□□□□ 0.58
HOXA11P31270 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXA11P31270 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
HOXA11P31270 AC107918.2-201ENST00000530817 355 ntBASIC18.67■□□□□ 0.58
HOXA11P31270 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
HOXA11P31270 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA11P31270 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.67■□□□□ 0.58
HOXA11P31270 AC007064.4-201ENST00000637740 555 ntBASIC18.67■□□□□ 0.58
HOXA11P31270 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HOXA11P31270 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA11P31270 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA11P31270 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.67■□□□□ 0.58
HOXA11P31270 AC129492.6-201ENST00000611383 1305 ntBASIC18.67■□□□□ 0.58
HOXA11P31270 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
HOXA11P31270 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA11P31270 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA11P31270 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
HOXA11P31270 AC018470.1-201ENST00000624790 3129 ntBASIC18.67■□□□□ 0.58
HOXA11P31270 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA11P31270 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
HOXA11P31270 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXA11P31270 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
HOXA11P31270 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
HOXA11P31270 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA11P31270 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXA11P31270 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA11P31270 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXA11P31270 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
HOXA11P31270 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA11P31270 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA11P31270 AC067852.2-201ENST00000590513 2313 ntBASIC18.66■□□□□ 0.58
HOXA11P31270 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.66■□□□□ 0.58
HOXA11P31270 AC211486.1-202ENST00000416371 468 ntBASIC18.66■□□□□ 0.58
HOXA11P31270 RPS8P6-201ENST00000426177 609 ntBASIC18.66■□□□□ 0.58
HOXA11P31270 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXA11P31270 MKNK2P1-201ENST00000437526 628 ntBASIC18.66■□□□□ 0.58
HOXA11P31270 AC211476.1-201ENST00000503899 468 ntBASIC18.66■□□□□ 0.58
HOXA11P31270 MIR4469-201ENST00000583919 79 ntBASIC18.66■□□□□ 0.58
HOXA11P31270 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXA11P31270 AL078644.1-201ENST00000609881 752 ntBASIC18.66■□□□□ 0.58
HOXA11P31270 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA11P31270 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA11P31270 AC020763.4-201ENST00000623414 4170 ntBASIC18.66■□□□□ 0.58
HOXA11P31270 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA11P31270 GNAS-203ENST00000306120 1878 ntBASIC18.66■□□□□ 0.58
HOXA11P31270 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXA11P31270 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXA11P31270 AC068880.1-201ENST00000507289 2297 ntBASIC18.66■□□□□ 0.58
HOXA11P31270 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXA11P31270 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXA11P31270 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA11P31270 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.66■□□□□ 0.58
HOXA11P31270 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA11P31270 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA11P31270 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXA11P31270 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA11P31270 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.66■□□□□ 0.58
HOXA11P31270 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HOXA11P31270 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
HOXA11P31270 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA11P31270 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA11P31270 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA11P31270 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXA11P31270 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA11P31270 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.65■□□□□ 0.58
HOXA11P31270 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA11P31270 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA11P31270 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXA11P31270 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA11P31270 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
HOXA11P31270 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.65■□□□□ 0.58
HOXA11P31270 AP006288.1-201ENST00000446065 395 ntBASIC18.65■□□□□ 0.58
HOXA11P31270 DNAJB3-202ENST00000449667 1266 ntBASIC18.65■□□□□ 0.58
HOXA11P31270 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC18.65■□□□□ 0.58
HOXA11P31270 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA11P31270 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXA11P31270 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.65■□□□□ 0.58
HOXA11P31270 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXA11P31270 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.65■□□□□ 0.58
HOXA11P31270 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA11P31270 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
HOXA11P31270 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms