Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TNFSF4P23510 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TNFSF4P23510 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFSF4P23510 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TNFSF4P23510 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFSF4P23510 UNC93B7-201ENST00000509439 705 ntBASIC14.9□□□□□ -0.02
TNFSF4P23510 AP001269.4-201ENST00000609611 512 ntBASIC14.9□□□□□ -0.02
TNFSF4P23510 AL355877.3-201ENST00000622820 899 ntBASIC14.9□□□□□ -0.02
TNFSF4P23510 AL139288.1-201ENST00000623748 933 ntBASIC14.9□□□□□ -0.02
TNFSF4P23510 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.9□□□□□ -0.02
TNFSF4P23510 AP000867.4-201ENST00000641616 219 ntBASIC14.9□□□□□ -0.02
TNFSF4P23510 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFSF4P23510 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
TNFSF4P23510 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TNFSF4P23510 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFSF4P23510 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TNFSF4P23510 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFSF4P23510 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TNFSF4P23510 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFSF4P23510 KRT8P10-201ENST00000450021 1447 ntBASIC14.9□□□□□ -0.02
TNFSF4P23510 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFSF4P23510 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFSF4P23510 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC14.9□□□□□ -0.02
TNFSF4P23510 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.9□□□□□ -0.02
TNFSF4P23510 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFSF4P23510 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TNFSF4P23510 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TNFSF4P23510 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFSF4P23510 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
TNFSF4P23510 AL356309.3-201ENST00000624132 1934 ntBASIC14.9□□□□□ -0.02
TNFSF4P23510 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TNFSF4P23510 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFSF4P23510 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFSF4P23510 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.9□□□□□ -0.02
TNFSF4P23510 PMPCAP1-201ENST00000508114 1576 ntBASIC14.9□□□□□ -0.02
TNFSF4P23510 AL049757.1-201ENST00000616842 1596 ntBASIC14.9□□□□□ -0.02
TNFSF4P23510 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TNFSF4P23510 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TNFSF4P23510 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFSF4P23510 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.89□□□□□ -0.03
TNFSF4P23510 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFSF4P23510 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFSF4P23510 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFSF4P23510 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.89□□□□□ -0.03
TNFSF4P23510 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.89□□□□□ -0.03
TNFSF4P23510 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFSF4P23510 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TNFSF4P23510 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TNFSF4P23510 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFSF4P23510 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TNFSF4P23510 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC14.89□□□□□ -0.03
TNFSF4P23510 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFSF4P23510 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.89□□□□□ -0.03
TNFSF4P23510 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 AL020989.1-201ENST00000422979 469 ntBASIC14.89□□□□□ -0.03
TNFSF4P23510 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFSF4P23510 SIGLEC30P-201ENST00000455569 941 ntBASIC14.89□□□□□ -0.03
TNFSF4P23510 EMBP1-201ENST00000458200 901 ntBASIC14.89□□□□□ -0.03
TNFSF4P23510 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.89□□□□□ -0.03
TNFSF4P23510 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFSF4P23510 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.89□□□□□ -0.03
TNFSF4P23510 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.89□□□□□ -0.03
TNFSF4P23510 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.89□□□□□ -0.03
TNFSF4P23510 AL121912.1-201ENST00000603683 238 ntBASIC14.89□□□□□ -0.03
TNFSF4P23510 AC019129.2-201ENST00000609837 1235 ntBASIC14.89□□□□□ -0.03
TNFSF4P23510 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.89□□□□□ -0.03
TNFSF4P23510 AC133963.1-201ENST00000504166 1679 ntBASIC14.89□□□□□ -0.03
TNFSF4P23510 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC14.89□□□□□ -0.03
TNFSF4P23510 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TNFSF4P23510 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFSF4P23510 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFSF4P23510 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.88□□□□□ -0.03
TNFSF4P23510 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFSF4P23510 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFSF4P23510 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFSF4P23510 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TNFSF4P23510 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TNFSF4P23510 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.88□□□□□ -0.03
TNFSF4P23510 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.88□□□□□ -0.03
TNFSF4P23510 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.88□□□□□ -0.03
TNFSF4P23510 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TNFSF4P23510 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms