Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.94■□□□□ 0.62
RFX1P22670 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX1P22670 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX1P22670 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RFX1P22670 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.94■□□□□ 0.62
RFX1P22670 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX1P22670 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFX1P22670 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RFX1P22670 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFX1P22670 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RFX1P22670 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RFX1P22670 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.94■□□□□ 0.62
RFX1P22670 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.94■□□□□ 0.62
RFX1P22670 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RFX1P22670 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.94■□□□□ 0.62
RFX1P22670 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RFX1P22670 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.94■□□□□ 0.62
RFX1P22670 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
RFX1P22670 ZNF259P1-201ENST00000407656 1365 ntBASIC18.93■□□□□ 0.62
RFX1P22670 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
RFX1P22670 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
RFX1P22670 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RFX1P22670 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.93■□□□□ 0.62
RFX1P22670 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX1P22670 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.93■□□□□ 0.62
RFX1P22670 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.93■□□□□ 0.62
RFX1P22670 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.93■□□□□ 0.62
RFX1P22670 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX1P22670 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX1P22670 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RFX1P22670 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX1P22670 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.93■□□□□ 0.62
RFX1P22670 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RFX1P22670 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
RFX1P22670 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
RFX1P22670 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX1P22670 AP001094.4-201ENST00000579008 2176 ntBASIC18.93■□□□□ 0.62
RFX1P22670 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RFX1P22670 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.93■□□□□ 0.62
RFX1P22670 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.93■□□□□ 0.62
RFX1P22670 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RFX1P22670 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFX1P22670 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.92■□□□□ 0.62
RFX1P22670 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFX1P22670 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFX1P22670 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.92■□□□□ 0.62
RFX1P22670 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX1P22670 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX1P22670 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RFX1P22670 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RFX1P22670 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.92■□□□□ 0.62
RFX1P22670 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.92■□□□□ 0.62
RFX1P22670 AC073648.2-201ENST00000510116 352 ntBASIC18.92■□□□□ 0.62
RFX1P22670 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFX1P22670 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.92■□□□□ 0.62
RFX1P22670 IGHV3-52-201ENST00000519770 353 ntBASIC18.92■□□□□ 0.62
RFX1P22670 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.92■□□□□ 0.62
RFX1P22670 AC019129.2-201ENST00000609837 1235 ntBASIC18.92■□□□□ 0.62
RFX1P22670 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.92■□□□□ 0.62
RFX1P22670 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFX1P22670 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
RFX1P22670 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.92■□□□□ 0.62
RFX1P22670 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX1P22670 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX1P22670 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RFX1P22670 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX1P22670 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX1P22670 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RFX1P22670 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX1P22670 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.92■□□□□ 0.62
RFX1P22670 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.92■□□□□ 0.62
RFX1P22670 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX1P22670 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RFX1P22670 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RFX1P22670 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RFX1P22670 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RFX1P22670 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.91■□□□□ 0.62
RFX1P22670 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFX1P22670 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFX1P22670 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
RFX1P22670 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFX1P22670 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFX1P22670 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFX1P22670 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFX1P22670 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
RFX1P22670 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFX1P22670 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFX1P22670 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RFX1P22670 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
RFX1P22670 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.91■□□□□ 0.62
RFX1P22670 POM121L3P-201ENST00000419331 1163 ntBASIC18.91■□□□□ 0.62
RFX1P22670 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.91■□□□□ 0.62
RFX1P22670 AC103564.2-201ENST00000432853 1299 ntBASIC18.91■□□□□ 0.62
RFX1P22670 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RFX1P22670 AC106730.1-201ENST00000566722 1090 ntBASIC18.91■□□□□ 0.62
RFX1P22670 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RFX1P22670 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.91■□□□□ 0.62
RFX1P22670 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.91■□□□□ 0.62
RFX1P22670 AC005336.2-201ENST00000593183 939 ntBASIC18.91■□□□□ 0.62
RFX1P22670 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms