Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH1P12830 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CDH1P12830 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CDH1P12830 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.98■□□□□ 0.31
CDH1P12830 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH1P12830 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CDH1P12830 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH1P12830 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.98■□□□□ 0.31
CDH1P12830 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CDH1P12830 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH1P12830 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH1P12830 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH1P12830 AC008894.3-201ENST00000624324 3103 ntBASIC16.97■□□□□ 0.31
CDH1P12830 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH1P12830 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH1P12830 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH1P12830 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.97■□□□□ 0.31
CDH1P12830 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH1P12830 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CDH1P12830 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH1P12830 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDH1P12830 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH1P12830 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.97■□□□□ 0.31
CDH1P12830 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH1P12830 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.97■□□□□ 0.31
CDH1P12830 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH1P12830 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH1P12830 AC109462.3-201ENST00000573934 613 ntBASIC16.97■□□□□ 0.31
CDH1P12830 MIR3652-201ENST00000579335 131 ntBASIC16.97■□□□□ 0.31
CDH1P12830 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.97■□□□□ 0.31
CDH1P12830 AC019129.2-201ENST00000609837 1235 ntBASIC16.97■□□□□ 0.31
CDH1P12830 AC114341.1-201ENST00000618070 349 ntBASIC16.97■□□□□ 0.31
CDH1P12830 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.97■□□□□ 0.31
CDH1P12830 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH1P12830 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CDH1P12830 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH1P12830 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH1P12830 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CDH1P12830 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH1P12830 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH1P12830 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH1P12830 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH1P12830 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CDH1P12830 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.97■□□□□ 0.31
CDH1P12830 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH1P12830 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH1P12830 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH1P12830 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH1P12830 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CDH1P12830 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH1P12830 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH1P12830 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH1P12830 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH1P12830 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH1P12830 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH1P12830 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH1P12830 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH1P12830 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH1P12830 AC002558.1-201ENST00000488906 803 ntBASIC16.96■□□□□ 0.31
CDH1P12830 FOSL1P1-201ENST00000511041 816 ntBASIC16.96■□□□□ 0.31
CDH1P12830 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.96■□□□□ 0.31
CDH1P12830 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.96■□□□□ 0.31
CDH1P12830 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH1P12830 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.96■□□□□ 0.31
CDH1P12830 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.96■□□□□ 0.31
CDH1P12830 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CDH1P12830 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH1P12830 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH1P12830 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CDH1P12830 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CDH1P12830 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH1P12830 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CDH1P12830 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
CDH1P12830 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH1P12830 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH1P12830 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH1P12830 AL118508.1-201ENST00000613502 2345 ntBASIC16.96■□□□□ 0.3
CDH1P12830 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDH1P12830 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH1P12830 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CDH1P12830 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CDH1P12830 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.96■□□□□ 0.3
CDH1P12830 CROCCP2-202ENST00000412962 2773 ntBASIC16.95■□□□□ 0.3
CDH1P12830 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CDH1P12830 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH1P12830 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.95■□□□□ 0.3
CDH1P12830 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH1P12830 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.95■□□□□ 0.3
CDH1P12830 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 POM121L3P-201ENST00000419331 1163 ntBASIC16.95■□□□□ 0.3
CDH1P12830 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH1P12830 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH1P12830 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms