Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TOP3BO95985 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP3BO95985 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP3BO95985 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.84■□□□□ 0.45
TOP3BO95985 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
TOP3BO95985 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TOP3BO95985 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.84■□□□□ 0.45
TOP3BO95985 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.84■□□□□ 0.45
TOP3BO95985 SCARNA2-201ENST00000458748 420 ntBASIC17.84■□□□□ 0.45
TOP3BO95985 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.84■□□□□ 0.45
TOP3BO95985 DUTP2-201ENST00000519164 463 ntBASIC17.84■□□□□ 0.45
TOP3BO95985 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.84■□□□□ 0.45
TOP3BO95985 MIR3180-4-201ENST00000582223 153 ntBASIC17.84■□□□□ 0.45
TOP3BO95985 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.84■□□□□ 0.45
TOP3BO95985 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP3BO95985 GPR32P1-201ENST00000601788 811 ntBASIC17.84■□□□□ 0.45
TOP3BO95985 AL356488.2-201ENST00000602755 427 ntBASIC17.84■□□□□ 0.45
TOP3BO95985 AL591684.3-201ENST00000605187 298 ntBASIC17.84■□□□□ 0.45
TOP3BO95985 AC008608.2-201ENST00000606089 416 ntBASIC17.84■□□□□ 0.45
TOP3BO95985 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.84■□□□□ 0.45
TOP3BO95985 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.84■□□□□ 0.45
TOP3BO95985 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TOP3BO95985 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP3BO95985 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP3BO95985 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TOP3BO95985 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP3BO95985 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP3BO95985 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TOP3BO95985 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.84■□□□□ 0.45
TOP3BO95985 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP3BO95985 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP3BO95985 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP3BO95985 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TOP3BO95985 NKILA-202ENST00000614771 2598 ntBASIC17.84■□□□□ 0.45
TOP3BO95985 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
TOP3BO95985 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
TOP3BO95985 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.83■□□□□ 0.45
TOP3BO95985 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
TOP3BO95985 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.83■□□□□ 0.44
TOP3BO95985 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TOP3BO95985 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.83■□□□□ 0.44
TOP3BO95985 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TOP3BO95985 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.83■□□□□ 0.44
TOP3BO95985 GPX1P2-201ENST00000429271 606 ntBASIC17.83■□□□□ 0.44
TOP3BO95985 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.83■□□□□ 0.44
TOP3BO95985 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.83■□□□□ 0.44
TOP3BO95985 AC112482.1-201ENST00000492080 688 ntBASIC17.83■□□□□ 0.44
TOP3BO95985 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.83■□□□□ 0.44
TOP3BO95985 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.83■□□□□ 0.44
TOP3BO95985 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.83■□□□□ 0.44
TOP3BO95985 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.83■□□□□ 0.44
TOP3BO95985 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TOP3BO95985 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.83■□□□□ 0.44
TOP3BO95985 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TOP3BO95985 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.83■□□□□ 0.44
TOP3BO95985 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TOP3BO95985 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TOP3BO95985 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
TOP3BO95985 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.83■□□□□ 0.44
TOP3BO95985 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TOP3BO95985 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TOP3BO95985 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
TOP3BO95985 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TOP3BO95985 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TOP3BO95985 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TOP3BO95985 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TOP3BO95985 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TOP3BO95985 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.83■□□□□ 0.44
TOP3BO95985 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.83■□□□□ 0.44
TOP3BO95985 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TOP3BO95985 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.82■□□□□ 0.44
TOP3BO95985 AC104109.2-201ENST00000602919 1418 ntBASIC17.82■□□□□ 0.44
TOP3BO95985 LINC00304-203ENST00000565008 1864 ntBASIC17.82■□□□□ 0.44
TOP3BO95985 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP3BO95985 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP3BO95985 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TOP3BO95985 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TOP3BO95985 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TOP3BO95985 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP3BO95985 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP3BO95985 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.82■□□□□ 0.44
TOP3BO95985 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP3BO95985 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP3BO95985 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP3BO95985 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TOP3BO95985 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP3BO95985 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
TOP3BO95985 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.82■□□□□ 0.44
TOP3BO95985 GUSBP12-201ENST00000513727 720 ntBASIC17.82■□□□□ 0.44
TOP3BO95985 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.82■□□□□ 0.44
TOP3BO95985 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.82■□□□□ 0.44
TOP3BO95985 MIR5100-201ENST00000579544 119 ntBASIC17.82■□□□□ 0.44
TOP3BO95985 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP3BO95985 AC133963.1-201ENST00000504166 1679 ntBASIC17.82■□□□□ 0.44
TOP3BO95985 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP3BO95985 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TOP3BO95985 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TOP3BO95985 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.82■□□□□ 0.44
TOP3BO95985 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TOP3BO95985 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms