Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PMPCBO75439 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PMPCBO75439 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PMPCBO75439 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.68■□□□□ 0.42
PMPCBO75439 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PMPCBO75439 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PMPCBO75439 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PMPCBO75439 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PMPCBO75439 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PMPCBO75439 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMPCBO75439 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMPCBO75439 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.67■□□□□ 0.42
PMPCBO75439 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMPCBO75439 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PMPCBO75439 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMPCBO75439 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMPCBO75439 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.67■□□□□ 0.42
PMPCBO75439 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.67■□□□□ 0.42
PMPCBO75439 AC016396.2-201ENST00000562575 1417 ntBASIC17.67■□□□□ 0.42
PMPCBO75439 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMPCBO75439 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMPCBO75439 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMPCBO75439 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.67■□□□□ 0.42
PMPCBO75439 KLF4P1-201ENST00000412782 1185 ntBASIC17.67■□□□□ 0.42
PMPCBO75439 KRT16P4-201ENST00000453883 522 ntBASIC17.67■□□□□ 0.42
PMPCBO75439 PRELID1P1-202ENST00000567272 903 ntBASIC17.67■□□□□ 0.42
PMPCBO75439 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.67■□□□□ 0.42
PMPCBO75439 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.67■□□□□ 0.42
PMPCBO75439 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.67■□□□□ 0.42
PMPCBO75439 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMPCBO75439 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
PMPCBO75439 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.67■□□□□ 0.42
PMPCBO75439 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PMPCBO75439 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PMPCBO75439 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMPCBO75439 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMPCBO75439 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PMPCBO75439 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PMPCBO75439 AC080080.1-201ENST00000625121 2420 ntBASIC17.67■□□□□ 0.42
PMPCBO75439 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PMPCBO75439 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PMPCBO75439 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.66■□□□□ 0.42
PMPCBO75439 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMPCBO75439 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PMPCBO75439 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PMPCBO75439 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMPCBO75439 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMPCBO75439 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PMPCBO75439 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.66■□□□□ 0.42
PMPCBO75439 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.66■□□□□ 0.42
PMPCBO75439 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMPCBO75439 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMPCBO75439 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.66■□□□□ 0.42
PMPCBO75439 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMPCBO75439 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PMPCBO75439 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.66■□□□□ 0.42
PMPCBO75439 NUS1P1-201ENST00000446295 882 ntBASIC17.66■□□□□ 0.42
PMPCBO75439 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.66■□□□□ 0.42
PMPCBO75439 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PMPCBO75439 AL732292.2-201ENST00000609649 430 ntBASIC17.66■□□□□ 0.42
PMPCBO75439 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PMPCBO75439 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PMPCBO75439 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.66■□□□□ 0.42
PMPCBO75439 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.66■□□□□ 0.42
PMPCBO75439 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PMPCBO75439 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMPCBO75439 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMPCBO75439 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PMPCBO75439 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMPCBO75439 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.66■□□□□ 0.42
PMPCBO75439 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMPCBO75439 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMPCBO75439 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMPCBO75439 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PMPCBO75439 AC009336.1-201ENST00000608941 1553 ntBASIC17.66■□□□□ 0.42
PMPCBO75439 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PMPCBO75439 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.65■□□□□ 0.42
PMPCBO75439 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.65■□□□□ 0.42
PMPCBO75439 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.65■□□□□ 0.42
PMPCBO75439 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.65■□□□□ 0.42
PMPCBO75439 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PMPCBO75439 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PMPCBO75439 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMPCBO75439 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PMPCBO75439 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMPCBO75439 AP001094.4-201ENST00000579008 2176 ntBASIC17.65■□□□□ 0.42
PMPCBO75439 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PMPCBO75439 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMPCBO75439 AC003669.1-201ENST00000334569 611 ntBASIC17.65■□□□□ 0.42
PMPCBO75439 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMPCBO75439 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.65■□□□□ 0.42
PMPCBO75439 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.65■□□□□ 0.42
PMPCBO75439 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMPCBO75439 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMPCBO75439 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PMPCBO75439 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PMPCBO75439 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PMPCBO75439 PMPCAP1-201ENST00000508114 1576 ntBASIC17.65■□□□□ 0.42
PMPCBO75439 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PMPCBO75439 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms