Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
HCN1O60741 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCN1O60741 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCN1O60741 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.29■□□□□ 0.2
HCN1O60741 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.29■□□□□ 0.2
HCN1O60741 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
HCN1O60741 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HCN1O60741 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HCN1O60741 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HCN1O60741 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.29■□□□□ 0.2
HCN1O60741 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCN1O60741 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.29■□□□□ 0.2
HCN1O60741 AL139384.1-201ENST00000612143 3047 ntBASIC16.29■□□□□ 0.2
HCN1O60741 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCN1O60741 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
HCN1O60741 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.29■□□□□ 0.2
HCN1O60741 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCN1O60741 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCN1O60741 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
HCN1O60741 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.29■□□□□ 0.2
HCN1O60741 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.29■□□□□ 0.2
HCN1O60741 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.29■□□□□ 0.2
HCN1O60741 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.29■□□□□ 0.2
HCN1O60741 EMBP1-201ENST00000458200 901 ntBASIC16.29■□□□□ 0.2
HCN1O60741 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.29■□□□□ 0.2
HCN1O60741 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCN1O60741 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCN1O60741 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCN1O60741 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCN1O60741 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HCN1O60741 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCN1O60741 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.29■□□□□ 0.2
HCN1O60741 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HCN1O60741 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.29■□□□□ 0.2
HCN1O60741 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCN1O60741 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCN1O60741 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HCN1O60741 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HCN1O60741 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.28■□□□□ 0.2
HCN1O60741 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.28■□□□□ 0.2
HCN1O60741 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 LINC00602-201ENST00000629776 2065 ntBASIC16.28■□□□□ 0.2
HCN1O60741 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.28■□□□□ 0.2
HCN1O60741 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HCN1O60741 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HCN1O60741 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
HCN1O60741 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.28■□□□□ 0.2
HCN1O60741 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
HCN1O60741 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.28■□□□□ 0.2
HCN1O60741 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
HCN1O60741 NUS1P2-201ENST00000417358 873 ntBASIC16.28■□□□□ 0.2
HCN1O60741 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.28■□□□□ 0.2
HCN1O60741 MTCL1P1-201ENST00000446207 792 ntBASIC16.28■□□□□ 0.2
HCN1O60741 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.28■□□□□ 0.2
HCN1O60741 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.28■□□□□ 0.2
HCN1O60741 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
HCN1O60741 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HCN1O60741 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.28■□□□□ 0.2
HCN1O60741 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.28■□□□□ 0.2
HCN1O60741 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
HCN1O60741 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 NFIC-211ENST00000641145 8399 ntBASIC16.28■□□□□ 0.2
HCN1O60741 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
HCN1O60741 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HCN1O60741 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.28■□□□□ 0.2
HCN1O60741 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.27■□□□□ 0.2
HCN1O60741 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HCN1O60741 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.27■□□□□ 0.2
HCN1O60741 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCN1O60741 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.27■□□□□ 0.2
HCN1O60741 FER1L4-210ENST00000615531 5998 ntBASIC16.27■□□□□ 0.2
HCN1O60741 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCN1O60741 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCN1O60741 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.27■□□□□ 0.2
HCN1O60741 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.27■□□□□ 0.2
HCN1O60741 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCN1O60741 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
HCN1O60741 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms