Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TRIM38O00635 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.53■□□□□ 0.4
TRIM38O00635 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM38O00635 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.53■□□□□ 0.4
TRIM38O00635 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TRIM38O00635 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TRIM38O00635 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM38O00635 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM38O00635 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM38O00635 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM38O00635 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM38O00635 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM38O00635 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRIM38O00635 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
TRIM38O00635 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM38O00635 TNRC18P3-201ENST00000441896 2691 ntBASIC17.52■□□□□ 0.4
TRIM38O00635 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.52■□□□□ 0.4
TRIM38O00635 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM38O00635 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM38O00635 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM38O00635 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRIM38O00635 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM38O00635 ABCD1P5-201ENST00000445663 754 ntBASIC17.52■□□□□ 0.4
TRIM38O00635 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TRIM38O00635 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM38O00635 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TRIM38O00635 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.52■□□□□ 0.4
TRIM38O00635 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM38O00635 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.52■□□□□ 0.4
TRIM38O00635 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.52■□□□□ 0.4
TRIM38O00635 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
TRIM38O00635 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM38O00635 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM38O00635 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.52■□□□□ 0.39
TRIM38O00635 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
TRIM38O00635 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TRIM38O00635 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM38O00635 ZNF259P1-201ENST00000407656 1365 ntBASIC17.52■□□□□ 0.39
TRIM38O00635 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM38O00635 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM38O00635 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM38O00635 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.52■□□□□ 0.39
TRIM38O00635 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.52■□□□□ 0.39
TRIM38O00635 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
TRIM38O00635 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TRIM38O00635 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM38O00635 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 AL023806.1-201ENST00000603994 1649 ntBASIC17.51■□□□□ 0.39
TRIM38O00635 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM38O00635 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM38O00635 RPS2P28-201ENST00000314255 741 ntBASIC17.51■□□□□ 0.39
TRIM38O00635 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM38O00635 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TRIM38O00635 RPS2P1-201ENST00000434010 821 ntBASIC17.51■□□□□ 0.39
TRIM38O00635 KRT18P65-201ENST00000439811 1286 ntBASIC17.51■□□□□ 0.39
TRIM38O00635 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM38O00635 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.51■□□□□ 0.39
TRIM38O00635 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRIM38O00635 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRIM38O00635 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TRIM38O00635 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
TRIM38O00635 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM38O00635 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.51■□□□□ 0.39
TRIM38O00635 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.51■□□□□ 0.39
TRIM38O00635 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.51■□□□□ 0.39
TRIM38O00635 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TRIM38O00635 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TRIM38O00635 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
TRIM38O00635 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
TRIM38O00635 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM38O00635 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
TRIM38O00635 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms