Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGA3Q9Y5H0 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 AC134043.2-201ENST00000624206 2238 ntBASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 MIR940-201ENST00000401276 94 ntBASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGA3Q9Y5H0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
PCDHGA3Q9Y5H0 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
PCDHGA3Q9Y5H0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHGA3Q9Y5H0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHGA3Q9Y5H0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHGA3Q9Y5H0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
PCDHGA3Q9Y5H0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
PCDHGA3Q9Y5H0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 AC141586.5-201ENST00000624546 2050 ntBASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 AC098831.1-202ENST00000438821 336 ntBASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 NKAPP1-205ENST00000585790 367 ntBASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 Z83851.2-201ENST00000609564 659 ntBASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 AC107918.4-202ENST00000641623 219 ntBASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.95■□□□□ 0.3
PCDHGA3Q9Y5H0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 FER1L4-210ENST00000615531 5998 ntBASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PCDHGA3Q9Y5H0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms