Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPS5Q9UPZ3 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPS5Q9UPZ3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPS5Q9UPZ3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HPS5Q9UPZ3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HPS5Q9UPZ3 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
HPS5Q9UPZ3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
HPS5Q9UPZ3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 GK-202ENST00000378941 458 ntTSL 3 BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 COX5BP2-201ENST00000392354 334 ntBASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 C20orf181-201ENST00000623918 480 ntBASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 AF228730.6-201ENST00000641497 218 ntBASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 AC084121.3-201ENST00000641716 218 ntBASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 AC105233.6-201ENST00000642093 218 ntBASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 AC063926.2-201ENST00000623766 1308 ntBASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HPS5Q9UPZ3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 BX276092.7-203ENST00000637198 1536 ntBASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 AC139713.2-201ENST00000641328 2723 ntBASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 AC027612.4-201ENST00000605371 583 ntBASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 LINC01451-201ENST00000623792 534 ntBASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HPS5Q9UPZ3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 NKAPP1-205ENST00000585790 367 ntBASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 AC011467.2-201ENST00000598425 242 ntBASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 AC079416.2-201ENST00000625035 1193 ntBASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 AC002310.6-201ENST00000624451 1377 ntBASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 AL645608.8-201ENST00000606034 2086 ntBASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.68■□□□□ 0.9
HPS5Q9UPZ3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HPS5Q9UPZ3 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HPS5Q9UPZ3 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
HPS5Q9UPZ3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HPS5Q9UPZ3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HPS5Q9UPZ3 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HPS5Q9UPZ3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HPS5Q9UPZ3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.67■□□□□ 0.9
HPS5Q9UPZ3 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.67■□□□□ 0.9
HPS5Q9UPZ3 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HPS5Q9UPZ3 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms