Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 AP002414.1-201ENST00000391405 1147 ntBASIC18.36■□□□□ 0.53
CDH9Q9ULB4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 PTCHD3P3-201ENST00000403073 906 ntBASIC18.36■□□□□ 0.53
CDH9Q9ULB4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 IGHV3-65-201ENST00000523210 341 ntBASIC18.36■□□□□ 0.53
CDH9Q9ULB4 KRT18P58-201ENST00000527480 1120 ntBASIC18.36■□□□□ 0.53
CDH9Q9ULB4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDH9Q9ULB4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 LBH-204ENST00000406087 559 ntTSL 4 BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 AC108751.1-201ENST00000490852 363 ntBASIC18.35■□□□□ 0.53
CDH9Q9ULB4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.35■□□□□ 0.53
CDH9Q9ULB4 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 AC016396.2-201ENST00000562575 1417 ntBASIC18.34■□□□□ 0.53
CDH9Q9ULB4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.34■□□□□ 0.53
CDH9Q9ULB4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.33■□□□□ 0.53
CDH9Q9ULB4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH9Q9ULB4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CDH9Q9ULB4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDH9Q9ULB4 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CDH9Q9ULB4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDH9Q9ULB4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH9Q9ULB4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDH9Q9ULB4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH9Q9ULB4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CDH9Q9ULB4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDH9Q9ULB4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CDH9Q9ULB4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.33■□□□□ 0.52
CDH9Q9ULB4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms