Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SLC25A24P2-201ENST00000415059 510 ntBASIC27.21■■□□□ 1.95
RIMBP3Q9UFD9 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC27.21■■□□□ 1.95
RIMBP3Q9UFD9 CSF2RBP1-201ENST00000447905 391 ntBASIC27.21■■□□□ 1.95
RIMBP3Q9UFD9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC27.21■■□□□ 1.95
RIMBP3Q9UFD9 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RIMBP3Q9UFD9 AC105129.2-201ENST00000559536 390 ntBASIC27.21■■□□□ 1.95
RIMBP3Q9UFD9 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC27.21■■□□□ 1.95
RIMBP3Q9UFD9 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC27.21■■□□□ 1.95
RIMBP3Q9UFD9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RIMBP3Q9UFD9 AC125437.2-201ENST00000625180 2167 ntBASIC27.21■■□□□ 1.95
RIMBP3Q9UFD9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RIMBP3Q9UFD9 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
RIMBP3Q9UFD9 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC27.2■■□□□ 1.95
RIMBP3Q9UFD9 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC27.2■■□□□ 1.95
RIMBP3Q9UFD9 MPRIPP1-201ENST00000452433 1089 ntBASIC27.2■■□□□ 1.95
RIMBP3Q9UFD9 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC27.2■■□□□ 1.95
RIMBP3Q9UFD9 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC27.2■■□□□ 1.95
RIMBP3Q9UFD9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC27.2■■□□□ 1.95
RIMBP3Q9UFD9 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
RIMBP3Q9UFD9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
RIMBP3Q9UFD9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.94
RIMBP3Q9UFD9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC27.2■■□□□ 1.94
RIMBP3Q9UFD9 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RIMBP3Q9UFD9 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC27.2■■□□□ 1.94
RIMBP3Q9UFD9 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
RIMBP3Q9UFD9 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 GGCT-203ENST00000409144 836 ntTSL 2 BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 DUTP2-201ENST00000519164 463 ntBASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 AC010319.3-201ENST00000597028 470 ntBASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 5S_rRNA.22-201ENST00000614916 106 ntBASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 AC023310.3-201ENST00000557027 670 ntBASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 AC100756.1-201ENST00000562736 682 ntBASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 AC138749.3-201ENST00000567691 622 ntBASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 AC116165.1-201ENST00000611806 668 ntBASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
RIMBP3Q9UFD9 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
RIMBP3Q9UFD9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RIMBP3Q9UFD9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC27.18■■□□□ 1.94
RIMBP3Q9UFD9 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
RIMBP3Q9UFD9 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC27.18■■□□□ 1.94
RIMBP3Q9UFD9 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC27.18■■□□□ 1.94
RIMBP3Q9UFD9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
RIMBP3Q9UFD9 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
RIMBP3Q9UFD9 AGER-203ENST00000375065 665 ntTSL 2 BASIC27.18■■□□□ 1.94
RIMBP3Q9UFD9 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
RIMBP3Q9UFD9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC27.18■■□□□ 1.94
RIMBP3Q9UFD9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC27.18■■□□□ 1.94
RIMBP3Q9UFD9 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
RIMBP3Q9UFD9 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC27.18■■□□□ 1.94
RIMBP3Q9UFD9 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC27.18■■□□□ 1.94
RIMBP3Q9UFD9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC27.18■■□□□ 1.94
RIMBP3Q9UFD9 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
RIMBP3Q9UFD9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC27.17■■□□□ 1.94
RIMBP3Q9UFD9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
RIMBP3Q9UFD9 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC27.17■■□□□ 1.94
RIMBP3Q9UFD9 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RIMBP3Q9UFD9 HINT2P1-201ENST00000419438 481 ntBASIC27.17■■□□□ 1.94
RIMBP3Q9UFD9 KRT43P-201ENST00000434019 910 ntBASIC27.17■■□□□ 1.94
RIMBP3Q9UFD9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC27.17■■□□□ 1.94
RIMBP3Q9UFD9 PFN1P12-201ENST00000455938 534 ntBASIC27.17■■□□□ 1.94
RIMBP3Q9UFD9 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RIMBP3Q9UFD9 AL133215.2-201ENST00000609242 977 ntBASIC27.17■■□□□ 1.94
RIMBP3Q9UFD9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RIMBP3Q9UFD9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RIMBP3Q9UFD9 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
RIMBP3Q9UFD9 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 RAB35-202ENST00000534951 939 ntTSL 2 BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC27.16■■□□□ 1.94
RIMBP3Q9UFD9 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms