Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GCM1Q9NP62 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.91□□□□□ -0.02
GCM1Q9NP62 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.91□□□□□ -0.02
GCM1Q9NP62 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
GCM1Q9NP62 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GCM1Q9NP62 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
GCM1Q9NP62 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GCM1Q9NP62 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.91□□□□□ -0.02
GCM1Q9NP62 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
GCM1Q9NP62 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GCM1Q9NP62 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
GCM1Q9NP62 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
GCM1Q9NP62 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.91□□□□□ -0.02
GCM1Q9NP62 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
GCM1Q9NP62 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
GCM1Q9NP62 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.9□□□□□ -0.02
GCM1Q9NP62 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.9□□□□□ -0.02
GCM1Q9NP62 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.9□□□□□ -0.02
GCM1Q9NP62 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.9□□□□□ -0.02
GCM1Q9NP62 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.9□□□□□ -0.02
GCM1Q9NP62 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
GCM1Q9NP62 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.9□□□□□ -0.02
GCM1Q9NP62 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.9□□□□□ -0.02
GCM1Q9NP62 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 RN7SL510P-201ENST00000581311 263 ntBASIC14.9□□□□□ -0.02
GCM1Q9NP62 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC14.9□□□□□ -0.02
GCM1Q9NP62 REXO1L6P-202ENST00000619970 1078 ntBASIC14.9□□□□□ -0.02
GCM1Q9NP62 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
GCM1Q9NP62 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
GCM1Q9NP62 REXO1L11P-201ENST00000620964 1927 ntBASIC14.9□□□□□ -0.02
GCM1Q9NP62 STK24-203ENST00000397517 4578 ntTSL 2 BASIC14.9□□□□□ -0.02
GCM1Q9NP62 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 AC134043.2-201ENST00000624206 2238 ntBASIC14.89□□□□□ -0.03
GCM1Q9NP62 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 ABCD1P5-201ENST00000445663 754 ntBASIC14.89□□□□□ -0.03
GCM1Q9NP62 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 SAPCD2P3-201ENST00000455031 850 ntBASIC14.89□□□□□ -0.03
GCM1Q9NP62 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 AL049757.1-201ENST00000616842 1596 ntBASIC14.89□□□□□ -0.03
GCM1Q9NP62 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.89□□□□□ -0.03
GCM1Q9NP62 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
GCM1Q9NP62 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
GCM1Q9NP62 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.88□□□□□ -0.03
GCM1Q9NP62 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
GCM1Q9NP62 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms