Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VPS11Q9H270 AL596275.1-201ENST00000423464 877 ntBASIC17.54■□□□□ 0.4
VPS11Q9H270 SPDYE15P-201ENST00000424157 909 ntBASIC17.54■□□□□ 0.4
VPS11Q9H270 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.54■□□□□ 0.4
VPS11Q9H270 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
VPS11Q9H270 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VPS11Q9H270 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.54■□□□□ 0.4
VPS11Q9H270 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.54■□□□□ 0.4
VPS11Q9H270 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.54■□□□□ 0.4
VPS11Q9H270 AC145285.6-201ENST00000604632 637 ntBASIC17.54■□□□□ 0.4
VPS11Q9H270 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
VPS11Q9H270 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.54■□□□□ 0.4
VPS11Q9H270 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS11Q9H270 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
VPS11Q9H270 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS11Q9H270 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VPS11Q9H270 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.54■□□□□ 0.4
VPS11Q9H270 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS11Q9H270 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
VPS11Q9H270 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS11Q9H270 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS11Q9H270 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.54■□□□□ 0.4
VPS11Q9H270 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS11Q9H270 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS11Q9H270 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.53■□□□□ 0.4
VPS11Q9H270 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.53■□□□□ 0.4
VPS11Q9H270 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.53■□□□□ 0.4
VPS11Q9H270 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
VPS11Q9H270 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
VPS11Q9H270 COX11P1-201ENST00000489116 835 ntBASIC17.53■□□□□ 0.4
VPS11Q9H270 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.53■□□□□ 0.4
VPS11Q9H270 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 AC010203.1-204ENST00000548782 407 ntBASIC17.53■□□□□ 0.4
VPS11Q9H270 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.53■□□□□ 0.4
VPS11Q9H270 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.53■□□□□ 0.4
VPS11Q9H270 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
VPS11Q9H270 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
VPS11Q9H270 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.53■□□□□ 0.4
VPS11Q9H270 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
VPS11Q9H270 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.53■□□□□ 0.4
VPS11Q9H270 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VPS11Q9H270 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS11Q9H270 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VPS11Q9H270 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
VPS11Q9H270 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.52■□□□□ 0.4
VPS11Q9H270 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS11Q9H270 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS11Q9H270 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS11Q9H270 AC005915.1-201ENST00000624912 2018 ntBASIC17.52■□□□□ 0.4
VPS11Q9H270 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS11Q9H270 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS11Q9H270 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS11Q9H270 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
VPS11Q9H270 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS11Q9H270 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS11Q9H270 FAM8A6P-201ENST00000407496 1135 ntBASIC17.52■□□□□ 0.4
VPS11Q9H270 AC087499.1-201ENST00000418141 1075 ntBASIC17.52■□□□□ 0.4
VPS11Q9H270 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.52■□□□□ 0.4
VPS11Q9H270 AC005104.2-201ENST00000427818 678 ntBASIC17.52■□□□□ 0.4
VPS11Q9H270 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.52■□□□□ 0.4
VPS11Q9H270 HLA-F-220ENST00000434407 884 ntBASIC17.52■□□□□ 0.4
VPS11Q9H270 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS11Q9H270 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS11Q9H270 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.52■□□□□ 0.4
VPS11Q9H270 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.52■□□□□ 0.4
VPS11Q9H270 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.52■□□□□ 0.4
VPS11Q9H270 AL031432.5-201ENST00000641059 760 ntBASIC17.52■□□□□ 0.4
VPS11Q9H270 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS11Q9H270 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS11Q9H270 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VPS11Q9H270 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
VPS11Q9H270 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
VPS11Q9H270 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.51■□□□□ 0.39
VPS11Q9H270 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms