Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 PCDH8P1-201ENST00000428983 2773 ntBASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 AC026396.1-201ENST00000419388 421 ntBASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 SPDYE13P-201ENST00000445314 798 ntBASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 AC009065.1-201ENST00000564055 1225 ntBASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 AC022898.2-201ENST00000616822 1312 ntBASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRIM55Q9BYV6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 AC008894.3-201ENST00000624324 3103 ntBASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 CR769767.2-201ENST00000622735 460 ntBASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 LINC01451-201ENST00000623792 534 ntBASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM55Q9BYV6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 KRT8P7-201ENST00000533003 1432 ntBASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM55Q9BYV6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms