Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.02■□□□□ 0.48
HAPLN3Q96S86 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HAPLN3Q96S86 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
HAPLN3Q96S86 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HAPLN3Q96S86 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HAPLN3Q96S86 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.01■□□□□ 0.47
HAPLN3Q96S86 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HAPLN3Q96S86 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18■□□□□ 0.47
HAPLN3Q96S86 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
HAPLN3Q96S86 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
HAPLN3Q96S86 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HAPLN3Q96S86 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HAPLN3Q96S86 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HAPLN3Q96S86 AL135999.2-201ENST00000622438 1686 ntBASIC18■□□□□ 0.47
HAPLN3Q96S86 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HAPLN3Q96S86 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
HAPLN3Q96S86 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18■□□□□ 0.47
HAPLN3Q96S86 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HAPLN3Q96S86 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18■□□□□ 0.47
HAPLN3Q96S86 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HAPLN3Q96S86 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HAPLN3Q96S86 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18■□□□□ 0.47
HAPLN3Q96S86 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18■□□□□ 0.47
HAPLN3Q96S86 AC079781.3-201ENST00000449110 356 ntBASIC18■□□□□ 0.47
HAPLN3Q96S86 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HAPLN3Q96S86 BX005266.1-201ENST00000473402 457 ntBASIC18■□□□□ 0.47
HAPLN3Q96S86 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
HAPLN3Q96S86 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18■□□□□ 0.47
HAPLN3Q96S86 AC104692.2-201ENST00000603054 253 ntBASIC18■□□□□ 0.47
HAPLN3Q96S86 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HAPLN3Q96S86 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18■□□□□ 0.47
HAPLN3Q96S86 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18■□□□□ 0.47
HAPLN3Q96S86 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
HAPLN3Q96S86 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18■□□□□ 0.47
HAPLN3Q96S86 AC046158.3-201ENST00000624947 2558 ntBASIC18■□□□□ 0.47
HAPLN3Q96S86 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18■□□□□ 0.47
HAPLN3Q96S86 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HAPLN3Q96S86 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18■□□□□ 0.47
HAPLN3Q96S86 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
HAPLN3Q96S86 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18■□□□□ 0.47
HAPLN3Q96S86 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 AC004817.3-201ENST00000602957 2129 ntBASIC17.99■□□□□ 0.47
HAPLN3Q96S86 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 AL031008.1-201ENST00000619963 541 ntBASIC17.99■□□□□ 0.47
HAPLN3Q96S86 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
HAPLN3Q96S86 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms