Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.91■□□□□ 0.14
SNX18Q96RF0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX18Q96RF0 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SNX18Q96RF0 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.91■□□□□ 0.14
SNX18Q96RF0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.91■□□□□ 0.14
SNX18Q96RF0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX18Q96RF0 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
SNX18Q96RF0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SNX18Q96RF0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX18Q96RF0 AC005052.1-201ENST00000625181 2492 ntBASIC15.91■□□□□ 0.14
SNX18Q96RF0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX18Q96RF0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SNX18Q96RF0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.91■□□□□ 0.14
SNX18Q96RF0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX18Q96RF0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX18Q96RF0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.91■□□□□ 0.14
SNX18Q96RF0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SNX18Q96RF0 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SNX18Q96RF0 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 KRT8P47-201ENST00000604727 1398 ntBASIC15.9■□□□□ 0.14
SNX18Q96RF0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.9■□□□□ 0.14
SNX18Q96RF0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SNX18Q96RF0 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
SNX18Q96RF0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX18Q96RF0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SNX18Q96RF0 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 AC009949.1-201ENST00000623048 1830 ntBASIC15.89■□□□□ 0.13
SNX18Q96RF0 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX18Q96RF0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SNX18Q96RF0 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX18Q96RF0 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SNX18Q96RF0 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX18Q96RF0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SNX18Q96RF0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX18Q96RF0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 AL031133.1-201ENST00000406807 723 ntBASIC15.89■□□□□ 0.13
SNX18Q96RF0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 HOMER2P1-201ENST00000455653 964 ntBASIC15.89■□□□□ 0.13
SNX18Q96RF0 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX18Q96RF0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SNX18Q96RF0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 AC004263.2-201ENST00000617183 678 ntBASIC15.89■□□□□ 0.13
SNX18Q96RF0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SNX18Q96RF0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms