Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC14.47□□□□□ -0.09
GAFA1Q96PS6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 AC116353.5-201ENST00000638148 1699 ntBASIC14.46□□□□□ -0.09
GAFA1Q96PS6 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 SLC25A1P3-201ENST00000395415 828 ntBASIC14.46□□□□□ -0.09
GAFA1Q96PS6 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 AC079781.3-201ENST00000449110 356 ntBASIC14.46□□□□□ -0.09
GAFA1Q96PS6 PRYP5-201ENST00000451909 266 ntBASIC14.46□□□□□ -0.09
GAFA1Q96PS6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 TP73-AS1-207ENST00000624167 988 ntBASIC14.46□□□□□ -0.09
GAFA1Q96PS6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.46□□□□□ -0.09
GAFA1Q96PS6 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
GAFA1Q96PS6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
GAFA1Q96PS6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
GAFA1Q96PS6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GAFA1Q96PS6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GAFA1Q96PS6 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 AC097637.2-201ENST00000624096 1997 ntBASIC14.45□□□□□ -0.1
GAFA1Q96PS6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 FAAHP1-202ENST00000446499 1238 ntBASIC14.45□□□□□ -0.1
GAFA1Q96PS6 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 MTDHP4-201ENST00000600287 670 ntBASIC14.45□□□□□ -0.1
GAFA1Q96PS6 AL031008.1-201ENST00000619963 541 ntBASIC14.45□□□□□ -0.1
GAFA1Q96PS6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
GAFA1Q96PS6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms