Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 FAM185BP-201ENST00000443595 716 ntBASIC20.21■□□□□ 0.83
CCDC17Q96LX7 PDPK2P-202ENST00000562415 1191 ntBASIC20.21■□□□□ 0.83
CCDC17Q96LX7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 AC005829.1-201ENST00000570002 483 ntBASIC20.21■□□□□ 0.83
CCDC17Q96LX7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 C20orf181-201ENST00000623918 480 ntBASIC20.21■□□□□ 0.83
CCDC17Q96LX7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC17Q96LX7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 AC087163.2-201ENST00000457299 853 ntBASIC20.2■□□□□ 0.82
CCDC17Q96LX7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 KRT19P2-202ENST00000557173 1012 ntBASIC20.2■□□□□ 0.82
CCDC17Q96LX7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 AC023141.13-201ENST00000604991 943 ntBASIC20.2■□□□□ 0.82
CCDC17Q96LX7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 BCAR1-209ENST00000546196 1340 ntBASIC20.2■□□□□ 0.82
CCDC17Q96LX7 AC129492.6-201ENST00000611383 1305 ntBASIC20.2■□□□□ 0.82
CCDC17Q96LX7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CCDC17Q96LX7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 AC004967.1-201ENST00000453589 447 ntBASIC20.19■□□□□ 0.82
CCDC17Q96LX7 YBX1P5-201ENST00000509441 847 ntBASIC20.19■□□□□ 0.82
CCDC17Q96LX7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 AC079781.4-201ENST00000641908 219 ntBASIC20.19■□□□□ 0.82
CCDC17Q96LX7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCDC17Q96LX7 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 MKNK2P1-201ENST00000437526 628 ntBASIC20.18■□□□□ 0.82
CCDC17Q96LX7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.18■□□□□ 0.82
CCDC17Q96LX7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms