Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM11Q96F44 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM11Q96F44 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TRIM11Q96F44 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM11Q96F44 SLC25A1P3-201ENST00000395415 828 ntBASIC18.42■□□□□ 0.54
TRIM11Q96F44 PCED1CP-201ENST00000419887 785 ntBASIC18.42■□□□□ 0.54
TRIM11Q96F44 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM11Q96F44 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.42■□□□□ 0.54
TRIM11Q96F44 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
TRIM11Q96F44 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
TRIM11Q96F44 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.42■□□□□ 0.54
TRIM11Q96F44 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM11Q96F44 AC011270.2-201ENST00000624293 2550 ntBASIC18.42■□□□□ 0.54
TRIM11Q96F44 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM11Q96F44 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM11Q96F44 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM11Q96F44 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.42■□□□□ 0.54
TRIM11Q96F44 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.42■□□□□ 0.54
TRIM11Q96F44 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
TRIM11Q96F44 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM11Q96F44 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM11Q96F44 IER3-202ENST00000376377 1350 ntBASIC18.42■□□□□ 0.54
TRIM11Q96F44 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRIM11Q96F44 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.41■□□□□ 0.54
TRIM11Q96F44 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC18.41■□□□□ 0.54
TRIM11Q96F44 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 AC022211.2-201ENST00000585075 2527 ntBASIC18.41■□□□□ 0.54
TRIM11Q96F44 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TRIM11Q96F44 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.41■□□□□ 0.54
TRIM11Q96F44 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.41■□□□□ 0.54
TRIM11Q96F44 AC091607.1-201ENST00000490318 1060 ntBASIC18.41■□□□□ 0.54
TRIM11Q96F44 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 STK19B-204ENST00000512515 211 ntBASIC18.41■□□□□ 0.54
TRIM11Q96F44 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.41■□□□□ 0.54
TRIM11Q96F44 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.41■□□□□ 0.54
TRIM11Q96F44 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
TRIM11Q96F44 AP005901.3-202ENST00000581653 237 ntBASIC18.41■□□□□ 0.54
TRIM11Q96F44 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TRIM11Q96F44 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 AC009336.1-201ENST00000608941 1553 ntBASIC18.41■□□□□ 0.54
TRIM11Q96F44 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.41■□□□□ 0.54
TRIM11Q96F44 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRIM11Q96F44 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM11Q96F44 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM11Q96F44 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM11Q96F44 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM11Q96F44 TP73-AS1-210ENST00000637775 1455 ntBASIC18.4■□□□□ 0.54
TRIM11Q96F44 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM11Q96F44 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM11Q96F44 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM11Q96F44 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
TRIM11Q96F44 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM11Q96F44 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRIM11Q96F44 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.4■□□□□ 0.54
TRIM11Q96F44 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM11Q96F44 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM11Q96F44 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM11Q96F44 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
TRIM11Q96F44 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM11Q96F44 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM11Q96F44 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TRIM11Q96F44 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.4■□□□□ 0.54
TRIM11Q96F44 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM11Q96F44 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.4■□□□□ 0.54
TRIM11Q96F44 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.4■□□□□ 0.54
TRIM11Q96F44 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM11Q96F44 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM11Q96F44 PCDHA12-202ENST00000613593 2588 ntBASIC18.4■□□□□ 0.54
TRIM11Q96F44 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM11Q96F44 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM11Q96F44 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM11Q96F44 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM11Q96F44 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM11Q96F44 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRIM11Q96F44 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM11Q96F44 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.39■□□□□ 0.54
TRIM11Q96F44 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM11Q96F44 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM11Q96F44 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRIM11Q96F44 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
TRIM11Q96F44 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
TRIM11Q96F44 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRIM11Q96F44 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms