Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PTP4A1Q93096 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PTP4A1Q93096 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.67■□□□□ 0.1
PTP4A1Q93096 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.67■□□□□ 0.1
PTP4A1Q93096 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PTP4A1Q93096 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 AC002558.1-201ENST00000488906 803 ntBASIC15.67■□□□□ 0.1
PTP4A1Q93096 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC15.67■□□□□ 0.1
PTP4A1Q93096 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.67■□□□□ 0.1
PTP4A1Q93096 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.67■□□□□ 0.1
PTP4A1Q93096 GPR32P1-201ENST00000601788 811 ntBASIC15.67■□□□□ 0.1
PTP4A1Q93096 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC15.67■□□□□ 0.1
PTP4A1Q93096 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.67■□□□□ 0.1
PTP4A1Q93096 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
PTP4A1Q93096 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC15.67■□□□□ 0.1
PTP4A1Q93096 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.67■□□□□ 0.1
PTP4A1Q93096 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PTP4A1Q93096 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
PTP4A1Q93096 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PTP4A1Q93096 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PTP4A1Q93096 AC103702.1-201ENST00000548801 2630 ntBASIC15.66■□□□□ 0.1
PTP4A1Q93096 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.66■□□□□ 0.1
PTP4A1Q93096 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A1Q93096 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.66■□□□□ 0.1
PTP4A1Q93096 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A1Q93096 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A1Q93096 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A1Q93096 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A1Q93096 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A1Q93096 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
PTP4A1Q93096 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PTP4A1Q93096 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A1Q93096 HBZP1-201ENST00000354915 429 ntBASIC15.66■□□□□ 0.1
PTP4A1Q93096 SAPCD2P2-201ENST00000431719 1174 ntBASIC15.66■□□□□ 0.1
PTP4A1Q93096 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.66■□□□□ 0.1
PTP4A1Q93096 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A1Q93096 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.66■□□□□ 0.1
PTP4A1Q93096 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A1Q93096 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.66■□□□□ 0.1
PTP4A1Q93096 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.66■□□□□ 0.1
PTP4A1Q93096 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A1Q93096 AC005332.3-201ENST00000589904 676 ntBASIC15.66■□□□□ 0.1
PTP4A1Q93096 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.66■□□□□ 0.1
PTP4A1Q93096 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.66■□□□□ 0.1
PTP4A1Q93096 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.66■□□□□ 0.1
PTP4A1Q93096 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A1Q93096 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC15.66■□□□□ 0.1
PTP4A1Q93096 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A1Q93096 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
PTP4A1Q93096 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A1Q93096 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A1Q93096 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A1Q93096 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
PTP4A1Q93096 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PTP4A1Q93096 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A1Q93096 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.66■□□□□ 0.1
PTP4A1Q93096 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A1Q93096 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PTP4A1Q93096 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
PTP4A1Q93096 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.65■□□□□ 0.1
PTP4A1Q93096 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.65■□□□□ 0.1
PTP4A1Q93096 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PTP4A1Q93096 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.65■□□□□ 0.1
PTP4A1Q93096 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PTP4A1Q93096 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.65■□□□□ 0.1
PTP4A1Q93096 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.65■□□□□ 0.1
PTP4A1Q93096 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PTP4A1Q93096 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms