Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 KRT18P13-201ENST00000400056 1290 ntBASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 RBM17P3-201ENST00000417687 1192 ntBASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 RPL13AP23-201ENST00000480739 586 ntBASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 KRT18P58-201ENST00000527480 1120 ntBASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 AC139887.3-201ENST00000568585 713 ntBASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 AL138831.2-201ENST00000606564 490 ntBASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 AC139530.3-201ENST00000620344 690 ntBASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 FAM215A-202ENST00000632077 792 ntBASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 INTS4P1-201ENST00000438455 1935 ntBASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.29■□□□□ 0.52
CCDC33Q8N5R6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 SCARNA2-201ENST00000458748 420 ntBASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 AC106730.1-201ENST00000566722 1090 ntBASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC33Q8N5R6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 AC125634.1-201ENST00000438758 1403 ntBASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CCDC33Q8N5R6 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CCDC33Q8N5R6 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC33Q8N5R6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
CCDC33Q8N5R6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC33Q8N5R6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 AC092865.5-201ENST00000545435 363 ntBASIC18.26■□□□□ 0.51
CCDC33Q8N5R6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms