Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 C2orf69P2-201ENST00000562032 1123 ntBASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 AL589739.1-201ENST00000607720 493 ntBASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 AL133215.2-201ENST00000609242 977 ntBASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 AL021578.1-201ENST00000613646 709 ntBASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 5S_rRNA.22-201ENST00000614916 106 ntBASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 AL049812.1-201ENST00000432563 2267 ntBASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LTBP4Q8N2S1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 AC005229.1-201ENST00000392885 409 ntBASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 LITAF-210ENST00000571976 548 ntTSL 2 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 LITAF-214ENST00000574703 486 ntTSL 2 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 PDIA3P1-201ENST00000471856 1510 ntBASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC23.78■■□□□ 1.4
LTBP4Q8N2S1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 MTRF1LP2-201ENST00000506027 1122 ntBASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 EFTUD1P1-204ENST00000560401 1798 ntBASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 PHGDH-209ENST00000641074 1780 ntBASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC23.77■■□□□ 1.4
LTBP4Q8N2S1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 RPS19-201ENST00000221975 500 ntTSL 3 BASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 AC114501.2-201ENST00000439631 535 ntBASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 IGHJ2P-201ENST00000454480 60 ntBASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 CTBP2P5-201ENST00000454986 1264 ntBASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 AC123567.1-201ENST00000548294 1261 ntBASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LTBP4Q8N2S1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC23.75■■□□□ 1.39
LTBP4Q8N2S1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LTBP4Q8N2S1 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms