Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 Z69720.1-201ENST00000601483 472 ntBASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 AC233702.3-201ENST00000578656 1387 ntBASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDKL3Q8IVW4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CDKL3Q8IVW4 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.89■□□□□ 0.46
CDKL3Q8IVW4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
CDKL3Q8IVW4 LINC02012-201ENST00000608206 1725 ntBASIC17.89■□□□□ 0.46
CDKL3Q8IVW4 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDKL3Q8IVW4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.89■□□□□ 0.46
CDKL3Q8IVW4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDKL3Q8IVW4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDKL3Q8IVW4 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 DRAXINP1-201ENST00000437611 948 ntBASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDKL3Q8IVW4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 TPSP2-201ENST00000561760 610 ntBASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.88■□□□□ 0.45
CDKL3Q8IVW4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL3Q8IVW4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL3Q8IVW4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL3Q8IVW4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL3Q8IVW4 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL3Q8IVW4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL3Q8IVW4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL3Q8IVW4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CDKL3Q8IVW4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDKL3Q8IVW4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms