Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 AD001527.2-201ENST00000622994 785 ntBASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 AD000864.1-201ENST00000624076 2295 ntBASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 INTS4P1-201ENST00000438455 1935 ntBASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ZNF549Q6P9A3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 AC132938.5-201ENST00000624980 1813 ntBASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 RCN1P2-201ENST00000398357 915 ntBASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 MIR1224-201ENST00000408193 85 ntBASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 MINOS1P3-201ENST00000457048 203 ntBASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 AC074051.2-201ENST00000565115 352 ntBASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 AC069148.1-201ENST00000608741 768 ntBASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 AC092119.3-201ENST00000612618 583 ntBASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ZNF549Q6P9A3 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 AC060834.1-201ENST00000443027 2032 ntBASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 ATP5G2P1-201ENST00000433580 426 ntBASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 AC111152.3-201ENST00000569699 673 ntBASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 AC091076.1-201ENST00000610741 619 ntBASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
ZNF549Q6P9A3 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
ZNF549Q6P9A3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms