Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AC002558.1-201ENST00000488906 803 ntBASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 AF238378.1-201ENST00000526806 358 ntBASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 AL031008.1-201ENST00000619963 541 ntBASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 AP000867.4-201ENST00000641616 219 ntBASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
TTC39BQ5VTQ0 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 AL160237.2-201ENST00000556165 472 ntBASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 AL355312.1-201ENST00000407115 2176 ntBASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TTC39BQ5VTQ0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.14■□□□□ 0.5
TTC39BQ5VTQ0 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TTC39BQ5VTQ0 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.14■□□□□ 0.5
TTC39BQ5VTQ0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TTC39BQ5VTQ0 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
TTC39BQ5VTQ0 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 PMPCAP1-201ENST00000508114 1576 ntBASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 FGFR3P6-201ENST00000457012 610 ntBASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 MTDHP3-201ENST00000594186 672 ntBASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 AL139288.1-201ENST00000623748 933 ntBASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 AL353593.2-201ENST00000602529 1483 ntBASIC18.14■□□□□ 0.49
TTC39BQ5VTQ0 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TTC39BQ5VTQ0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms