Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC23.14■■□□□ 1.29
COL16A1Q07092 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC23.13■■□□□ 1.29
COL16A1Q07092 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL16A1Q07092 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
COL16A1Q07092 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL16A1Q07092 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL16A1Q07092 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC23.13■■□□□ 1.29
COL16A1Q07092 AP3S2-216ENST00000617003 1561 ntBASIC23.13■■□□□ 1.29
COL16A1Q07092 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL16A1Q07092 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL16A1Q07092 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL16A1Q07092 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL16A1Q07092 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL16A1Q07092 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
COL16A1Q07092 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC23.13■■□□□ 1.29
COL16A1Q07092 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC23.13■■□□□ 1.29
COL16A1Q07092 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
COL16A1Q07092 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC23.13■■□□□ 1.29
COL16A1Q07092 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.13■■□□□ 1.29
COL16A1Q07092 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC23.13■■□□□ 1.29
COL16A1Q07092 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC23.12■■□□□ 1.29
COL16A1Q07092 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
COL16A1Q07092 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC23.12■■□□□ 1.29
COL16A1Q07092 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
COL16A1Q07092 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
COL16A1Q07092 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL16A1Q07092 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC23.12■■□□□ 1.29
COL16A1Q07092 GNAQP1-201ENST00000444815 1067 ntBASIC23.12■■□□□ 1.29
COL16A1Q07092 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC23.12■■□□□ 1.29
COL16A1Q07092 BNIP3P42-201ENST00000454982 569 ntBASIC23.12■■□□□ 1.29
COL16A1Q07092 AC011495.1-201ENST00000498085 584 ntBASIC23.12■■□□□ 1.29
COL16A1Q07092 MTRF1LP2-201ENST00000506027 1122 ntBASIC23.12■■□□□ 1.29
COL16A1Q07092 SPDYE18-201ENST00000510091 1050 ntBASIC23.12■■□□□ 1.29
COL16A1Q07092 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC23.12■■□□□ 1.29
COL16A1Q07092 IGHV3OR16-16-201ENST00000563644 343 ntBASIC23.12■■□□□ 1.29
COL16A1Q07092 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC23.12■■□□□ 1.29
COL16A1Q07092 BNIP3P29-201ENST00000598302 571 ntBASIC23.12■■□□□ 1.29
COL16A1Q07092 AC003101.2-201ENST00000612557 442 ntBASIC23.12■■□□□ 1.29
COL16A1Q07092 AC011447.5-201ENST00000616168 564 ntBASIC23.12■■□□□ 1.29
COL16A1Q07092 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC23.12■■□□□ 1.29
COL16A1Q07092 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC23.12■■□□□ 1.29
COL16A1Q07092 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC23.12■■□□□ 1.29
COL16A1Q07092 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC23.12■■□□□ 1.29
COL16A1Q07092 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
COL16A1Q07092 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL16A1Q07092 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL16A1Q07092 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC23.12■■□□□ 1.29
COL16A1Q07092 HAUS4P1-201ENST00000406739 1145 ntBASIC23.11■■□□□ 1.29
COL16A1Q07092 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC23.11■■□□□ 1.29
COL16A1Q07092 AC234783.1-201ENST00000441761 496 ntBASIC23.11■■□□□ 1.29
COL16A1Q07092 AC105233.2-201ENST00000523697 349 ntBASIC23.11■■□□□ 1.29
COL16A1Q07092 AF228730.5-201ENST00000530288 346 ntBASIC23.11■■□□□ 1.29
COL16A1Q07092 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
COL16A1Q07092 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL16A1Q07092 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL16A1Q07092 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
COL16A1Q07092 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
COL16A1Q07092 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL16A1Q07092 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL16A1Q07092 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL16A1Q07092 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
COL16A1Q07092 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
COL16A1Q07092 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
COL16A1Q07092 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
COL16A1Q07092 NME6-203ENST00000415644 849 ntTSL 2 BASIC23.11■■□□□ 1.29
COL16A1Q07092 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC23.11■■□□□ 1.29
COL16A1Q07092 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC23.11■■□□□ 1.29
COL16A1Q07092 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC23.11■■□□□ 1.29
COL16A1Q07092 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC23.11■■□□□ 1.29
COL16A1Q07092 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC23.11■■□□□ 1.29
COL16A1Q07092 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC23.11■■□□□ 1.29
COL16A1Q07092 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC23.11■■□□□ 1.29
COL16A1Q07092 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC23.11■■□□□ 1.29
COL16A1Q07092 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC23.11■■□□□ 1.29
COL16A1Q07092 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC23.11■■□□□ 1.29
COL16A1Q07092 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC23.11■■□□□ 1.29
COL16A1Q07092 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL16A1Q07092 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL16A1Q07092 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL16A1Q07092 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL16A1Q07092 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL16A1Q07092 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC23.1■■□□□ 1.29
COL16A1Q07092 SLC7A15P-201ENST00000424028 1363 ntBASIC23.1■■□□□ 1.29
COL16A1Q07092 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL16A1Q07092 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC23.1■■□□□ 1.29
COL16A1Q07092 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
COL16A1Q07092 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
COL16A1Q07092 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL16A1Q07092 RPL28-204ENST00000431533 590 ntTSL 2 BASIC23.1■■□□□ 1.29
COL16A1Q07092 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC23.1■■□□□ 1.29
COL16A1Q07092 FUZ-207ENST00000526575 482 ntTSL 4 BASIC23.1■■□□□ 1.29
COL16A1Q07092 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
COL16A1Q07092 RPL28-206ENST00000558752 671 ntTSL 3 BASIC23.1■■□□□ 1.29
COL16A1Q07092 AL138918.1-201ENST00000568306 659 ntBASIC23.1■■□□□ 1.29
COL16A1Q07092 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC23.1■■□□□ 1.29
COL16A1Q07092 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
COL16A1Q07092 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL16A1Q07092 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
COL16A1Q07092 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
COL16A1Q07092 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms