Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 ARTN-206ENST00000472435 402 ntTSL 3 BASIC12.76□□□□□ -0.37
APOC4P55056 IGHV3-22-201ENST00000520721 359 ntBASIC12.76□□□□□ -0.37
APOC4P55056 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
APOC4P55056 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.76□□□□□ -0.37
APOC4P55056 AC145285.3-201ENST00000564603 959 ntBASIC12.76□□□□□ -0.37
APOC4P55056 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC4P55056 TERC-201ENST00000602385 541 ntBASIC12.76□□□□□ -0.37
APOC4P55056 AC027601.4-201ENST00000611259 610 ntBASIC12.76□□□□□ -0.37
APOC4P55056 AC004706.3-202ENST00000621574 984 ntBASIC12.76□□□□□ -0.37
APOC4P55056 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.76□□□□□ -0.37
APOC4P55056 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
APOC4P55056 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC4P55056 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC4P55056 AC104109.2-201ENST00000602919 1418 ntBASIC12.76□□□□□ -0.37
APOC4P55056 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
APOC4P55056 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC12.76□□□□□ -0.37
APOC4P55056 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
APOC4P55056 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC4P55056 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC12.76□□□□□ -0.37
APOC4P55056 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
APOC4P55056 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 AC097637.2-201ENST00000624096 1997 ntBASIC12.76□□□□□ -0.37
APOC4P55056 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
APOC4P55056 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
APOC4P55056 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC4P55056 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC4P55056 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC4P55056 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
APOC4P55056 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC4P55056 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC4P55056 PKD1P5-201ENST00000532415 10291 ntBASIC12.75□□□□□ -0.37
APOC4P55056 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC4P55056 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
APOC4P55056 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC4P55056 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC4P55056 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC4P55056 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOC4P55056 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC4P55056 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC4P55056 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
APOC4P55056 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
APOC4P55056 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
APOC4P55056 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC4P55056 STK24-203ENST00000397517 4578 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC4P55056 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC12.75□□□□□ -0.37
APOC4P55056 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC12.75□□□□□ -0.37
APOC4P55056 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC4P55056 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC4P55056 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC4P55056 RNA5SP415-201ENST00000517246 115 ntBASIC12.75□□□□□ -0.37
APOC4P55056 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC12.75□□□□□ -0.37
APOC4P55056 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC4P55056 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC4P55056 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC4P55056 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
APOC4P55056 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC4P55056 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC4P55056 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC12.75□□□□□ -0.37
APOC4P55056 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.75□□□□□ -0.37
APOC4P55056 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC4P55056 AL139424.1-201ENST00000607572 797 ntBASIC12.75□□□□□ -0.37
APOC4P55056 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC12.75□□□□□ -0.37
APOC4P55056 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC4P55056 AC135050.7-201ENST00000624508 2218 ntBASIC12.75□□□□□ -0.37
APOC4P55056 AC148477.5-201ENST00000625164 1645 ntBASIC12.75□□□□□ -0.37
APOC4P55056 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC4P55056 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC12.75□□□□□ -0.37
APOC4P55056 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC12.75□□□□□ -0.37
APOC4P55056 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
APOC4P55056 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC4P55056 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
APOC4P55056 AL354751.1-201ENST00000412768 1863 ntBASIC12.74□□□□□ -0.37
APOC4P55056 AC046185.3-201ENST00000623228 1824 ntBASIC12.74□□□□□ -0.37
APOC4P55056 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
APOC4P55056 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 AP002414.3-201ENST00000589352 1468 ntBASIC12.74□□□□□ -0.37
APOC4P55056 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC12.74□□□□□ -0.37
APOC4P55056 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
APOC4P55056 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
APOC4P55056 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC12.74□□□□□ -0.37
APOC4P55056 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms