Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA4P54764 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.74■□□□□ 0.27
EPHA4P54764 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.74■□□□□ 0.27
EPHA4P54764 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA4P54764 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
EPHA4P54764 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA4P54764 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.74■□□□□ 0.27
EPHA4P54764 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA4P54764 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA4P54764 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
EPHA4P54764 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.74■□□□□ 0.27
EPHA4P54764 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA4P54764 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA4P54764 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA4P54764 MRPL20P1-201ENST00000400819 433 ntBASIC16.74■□□□□ 0.27
EPHA4P54764 PTCHD3P3-201ENST00000403073 906 ntBASIC16.74■□□□□ 0.27
EPHA4P54764 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
EPHA4P54764 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.74■□□□□ 0.27
EPHA4P54764 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.74■□□□□ 0.27
EPHA4P54764 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
EPHA4P54764 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.74■□□□□ 0.27
EPHA4P54764 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.74■□□□□ 0.27
EPHA4P54764 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.74■□□□□ 0.27
EPHA4P54764 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.74■□□□□ 0.27
EPHA4P54764 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
EPHA4P54764 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.74■□□□□ 0.27
EPHA4P54764 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.74■□□□□ 0.27
EPHA4P54764 AC010654.1-201ENST00000615722 808 ntBASIC16.74■□□□□ 0.27
EPHA4P54764 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
EPHA4P54764 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA4P54764 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.74■□□□□ 0.27
EPHA4P54764 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.74■□□□□ 0.27
EPHA4P54764 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
EPHA4P54764 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
EPHA4P54764 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA4P54764 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA4P54764 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA4P54764 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA4P54764 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.74■□□□□ 0.27
EPHA4P54764 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA4P54764 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA4P54764 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA4P54764 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA4P54764 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
EPHA4P54764 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
EPHA4P54764 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.73■□□□□ 0.27
EPHA4P54764 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.73■□□□□ 0.27
EPHA4P54764 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.73■□□□□ 0.27
EPHA4P54764 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.73■□□□□ 0.27
EPHA4P54764 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.73■□□□□ 0.27
EPHA4P54764 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.73■□□□□ 0.27
EPHA4P54764 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.73■□□□□ 0.27
EPHA4P54764 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.73■□□□□ 0.27
EPHA4P54764 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.73■□□□□ 0.27
EPHA4P54764 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.73■□□□□ 0.27
EPHA4P54764 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.73■□□□□ 0.27
EPHA4P54764 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.73■□□□□ 0.27
EPHA4P54764 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.73■□□□□ 0.27
EPHA4P54764 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
EPHA4P54764 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA4P54764 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA4P54764 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA4P54764 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA4P54764 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.72■□□□□ 0.27
EPHA4P54764 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA4P54764 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.72■□□□□ 0.27
EPHA4P54764 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.72■□□□□ 0.27
EPHA4P54764 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA4P54764 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA4P54764 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA4P54764 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
EPHA4P54764 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.72■□□□□ 0.27
EPHA4P54764 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.72■□□□□ 0.27
EPHA4P54764 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
EPHA4P54764 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.72■□□□□ 0.27
EPHA4P54764 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
EPHA4P54764 YBX2P1-201ENST00000394192 760 ntBASIC16.72■□□□□ 0.27
EPHA4P54764 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms