Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CPT1AP50416 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPT1AP50416 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.17■□□□□ 0.66
CPT1AP50416 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.17■□□□□ 0.66
CPT1AP50416 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.17■□□□□ 0.66
CPT1AP50416 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.17■□□□□ 0.66
CPT1AP50416 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPT1AP50416 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CPT1AP50416 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPT1AP50416 ADH5P3-201ENST00000433842 1137 ntBASIC19.17■□□□□ 0.66
CPT1AP50416 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPT1AP50416 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.17■□□□□ 0.66
CPT1AP50416 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.17■□□□□ 0.66
CPT1AP50416 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPT1AP50416 FAM86C2P-203ENST00000528684 1004 ntBASIC19.17■□□□□ 0.66
CPT1AP50416 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPT1AP50416 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CPT1AP50416 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CPT1AP50416 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CPT1AP50416 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.17■□□□□ 0.66
CPT1AP50416 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CPT1AP50416 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CPT1AP50416 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.17■□□□□ 0.66
CPT1AP50416 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPT1AP50416 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPT1AP50416 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPT1AP50416 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPT1AP50416 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPT1AP50416 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPT1AP50416 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPT1AP50416 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.16■□□□□ 0.66
CPT1AP50416 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.16■□□□□ 0.66
CPT1AP50416 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.16■□□□□ 0.66
CPT1AP50416 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CPT1AP50416 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPT1AP50416 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.16■□□□□ 0.66
CPT1AP50416 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.16■□□□□ 0.66
CPT1AP50416 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.16■□□□□ 0.66
CPT1AP50416 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.16■□□□□ 0.66
CPT1AP50416 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CPT1AP50416 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CPT1AP50416 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPT1AP50416 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CPT1AP50416 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.16■□□□□ 0.66
CPT1AP50416 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPT1AP50416 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPT1AP50416 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPT1AP50416 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPT1AP50416 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPT1AP50416 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC19.16■□□□□ 0.66
CPT1AP50416 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CPT1AP50416 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CPT1AP50416 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPT1AP50416 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CPT1AP50416 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPT1AP50416 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.15■□□□□ 0.66
CPT1AP50416 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPT1AP50416 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CPT1AP50416 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CPT1AP50416 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CPT1AP50416 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.15■□□□□ 0.66
CPT1AP50416 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPT1AP50416 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPT1AP50416 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.15■□□□□ 0.66
CPT1AP50416 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPT1AP50416 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CPT1AP50416 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPT1AP50416 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPT1AP50416 AC140658.5-201ENST00000438532 169 ntBASIC19.15■□□□□ 0.66
CPT1AP50416 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.15■□□□□ 0.66
CPT1AP50416 TIMM8BP1-201ENST00000452384 211 ntBASIC19.15■□□□□ 0.66
CPT1AP50416 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CPT1AP50416 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.15■□□□□ 0.66
CPT1AP50416 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CPT1AP50416 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
CPT1AP50416 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CPT1AP50416 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
CPT1AP50416 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.15■□□□□ 0.66
CPT1AP50416 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CPT1AP50416 AC026120.1-201ENST00000611536 926 ntBASIC19.15■□□□□ 0.66
CPT1AP50416 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.15■□□□□ 0.66
CPT1AP50416 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC19.15■□□□□ 0.66
CPT1AP50416 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
CPT1AP50416 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPT1AP50416 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CPT1AP50416 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CPT1AP50416 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
CPT1AP50416 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CPT1AP50416 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPT1AP50416 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.15■□□□□ 0.66
CPT1AP50416 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CPT1AP50416 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CPT1AP50416 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPT1AP50416 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.14■□□□□ 0.66
CPT1AP50416 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPT1AP50416 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CPT1AP50416 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.14■□□□□ 0.66
CPT1AP50416 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CPT1AP50416 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.14■□□□□ 0.65
CPT1AP50416 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms