Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CENPFP49454 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.44■□□□□ 0.7
CENPFP49454 CROCCP3-202ENST00000420820 1947 ntBASIC19.44■□□□□ 0.7
CENPFP49454 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CENPFP49454 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CENPFP49454 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.44■□□□□ 0.7
CENPFP49454 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC19.44■□□□□ 0.7
CENPFP49454 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CENPFP49454 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CENPFP49454 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CENPFP49454 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.44■□□□□ 0.7
CENPFP49454 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.44■□□□□ 0.7
CENPFP49454 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CENPFP49454 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.44■□□□□ 0.7
CENPFP49454 AC005237.2-201ENST00000434368 219 ntBASIC19.44■□□□□ 0.7
CENPFP49454 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.44■□□□□ 0.7
CENPFP49454 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPFP49454 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPFP49454 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPFP49454 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPFP49454 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.43■□□□□ 0.7
CENPFP49454 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CENPFP49454 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPFP49454 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPFP49454 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPFP49454 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CENPFP49454 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.43■□□□□ 0.7
CENPFP49454 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.43■□□□□ 0.7
CENPFP49454 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.43■□□□□ 0.7
CENPFP49454 AL138828.2-201ENST00000615812 383 ntBASIC19.43■□□□□ 0.7
CENPFP49454 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CENPFP49454 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.43■□□□□ 0.7
CENPFP49454 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.43■□□□□ 0.7
CENPFP49454 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CENPFP49454 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CENPFP49454 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CENPFP49454 AC093010.1-201ENST00000473625 1624 ntBASIC19.43■□□□□ 0.7
CENPFP49454 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CENPFP49454 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CENPFP49454 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CENPFP49454 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.43■□□□□ 0.7
CENPFP49454 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.42■□□□□ 0.7
CENPFP49454 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPFP49454 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.42■□□□□ 0.7
CENPFP49454 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPFP49454 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CENPFP49454 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPFP49454 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPFP49454 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CENPFP49454 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPFP49454 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CENPFP49454 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CENPFP49454 AC132938.2-201ENST00000579188 680 ntBASIC19.42■□□□□ 0.7
CENPFP49454 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CENPFP49454 AL591163.1-201ENST00000641757 987 ntBASIC19.42■□□□□ 0.7
CENPFP49454 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.42■□□□□ 0.7
CENPFP49454 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.42■□□□□ 0.7
CENPFP49454 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CENPFP49454 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPFP49454 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CENPFP49454 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPFP49454 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.42■□□□□ 0.7
CENPFP49454 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CENPFP49454 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CENPFP49454 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.42■□□□□ 0.7
CENPFP49454 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC19.42■□□□□ 0.7
CENPFP49454 AC109462.3-201ENST00000573934 613 ntBASIC19.42■□□□□ 0.7
CENPFP49454 SLC25A24-204ENST00000569674 2357 ntBASIC19.41■□□□□ 0.7
CENPFP49454 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CENPFP49454 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.41■□□□□ 0.7
CENPFP49454 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.41■□□□□ 0.7
CENPFP49454 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CENPFP49454 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.41■□□□□ 0.7
CENPFP49454 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CENPFP49454 AC004945.1-201ENST00000416738 983 ntBASIC19.41■□□□□ 0.7
CENPFP49454 SLC25A6P2-201ENST00000497974 877 ntBASIC19.41■□□□□ 0.7
CENPFP49454 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CENPFP49454 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CENPFP49454 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.41■□□□□ 0.7
CENPFP49454 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.41■□□□□ 0.7
CENPFP49454 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CENPFP49454 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CENPFP49454 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.41■□□□□ 0.7
CENPFP49454 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC19.41■□□□□ 0.7
CENPFP49454 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CENPFP49454 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.41■□□□□ 0.7
CENPFP49454 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.41■□□□□ 0.7
CENPFP49454 AC084346.2-201ENST00000607097 949 ntBASIC19.41■□□□□ 0.7
CENPFP49454 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.41■□□□□ 0.7
CENPFP49454 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CENPFP49454 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.41■□□□□ 0.7
CENPFP49454 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CENPFP49454 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CENPFP49454 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.4■□□□□ 0.7
CENPFP49454 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CENPFP49454 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.4■□□□□ 0.7
CENPFP49454 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.4■□□□□ 0.7
CENPFP49454 KRT17P7-201ENST00000451704 1104 ntBASIC19.4■□□□□ 0.7
CENPFP49454 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.4■□□□□ 0.7
CENPFP49454 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms