Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.63■□□□□ 0.73
TM4SF4P48230 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF4P48230 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.63■□□□□ 0.73
TM4SF4P48230 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF4P48230 IGHV3-72-202ENST00000621503 303 ntBASIC19.63■□□□□ 0.73
TM4SF4P48230 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF4P48230 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF4P48230 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TM4SF4P48230 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.63■□□□□ 0.73
TM4SF4P48230 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF4P48230 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF4P48230 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF4P48230 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.62■□□□□ 0.73
TM4SF4P48230 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC19.62■□□□□ 0.73
TM4SF4P48230 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF4P48230 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF4P48230 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.62■□□□□ 0.73
TM4SF4P48230 AC079776.1-201ENST00000401540 1152 ntBASIC19.62■□□□□ 0.73
TM4SF4P48230 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.62■□□□□ 0.73
TM4SF4P48230 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.62■□□□□ 0.73
TM4SF4P48230 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC19.62■□□□□ 0.73
TM4SF4P48230 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TM4SF4P48230 AC009407.1-201ENST00000568958 598 ntBASIC19.62■□□□□ 0.73
TM4SF4P48230 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC19.62■□□□□ 0.73
TM4SF4P48230 AC140912.1-201ENST00000577171 1054 ntBASIC19.62■□□□□ 0.73
TM4SF4P48230 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC19.62■□□□□ 0.73
TM4SF4P48230 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC19.62■□□□□ 0.73
TM4SF4P48230 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC19.62■□□□□ 0.73
TM4SF4P48230 AC007967.4-201ENST00000614700 386 ntBASIC19.62■□□□□ 0.73
TM4SF4P48230 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.62■□□□□ 0.73
TM4SF4P48230 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TM4SF4P48230 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TM4SF4P48230 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.61■□□□□ 0.73
TM4SF4P48230 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.61■□□□□ 0.73
TM4SF4P48230 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF4P48230 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.61■□□□□ 0.73
TM4SF4P48230 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.61■□□□□ 0.73
TM4SF4P48230 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.61■□□□□ 0.73
TM4SF4P48230 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
TM4SF4P48230 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF4P48230 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF4P48230 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TM4SF4P48230 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF4P48230 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC19.61■□□□□ 0.73
TM4SF4P48230 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF4P48230 ACA64.2-201ENST00000459014 129 ntBASIC19.61■□□□□ 0.73
TM4SF4P48230 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.61■□□□□ 0.73
TM4SF4P48230 AL132655.2-201ENST00000596276 594 ntBASIC19.61■□□□□ 0.73
TM4SF4P48230 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.61■□□□□ 0.73
TM4SF4P48230 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
TM4SF4P48230 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF4P48230 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TM4SF4P48230 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.61■□□□□ 0.73
TM4SF4P48230 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.61■□□□□ 0.73
TM4SF4P48230 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
TM4SF4P48230 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF4P48230 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.6■□□□□ 0.73
TM4SF4P48230 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.6■□□□□ 0.73
TM4SF4P48230 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF4P48230 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF4P48230 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TM4SF4P48230 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
TM4SF4P48230 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF4P48230 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC19.6■□□□□ 0.73
TM4SF4P48230 MIR1909-201ENST00000411312 80 ntBASIC19.6■□□□□ 0.73
TM4SF4P48230 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC19.6■□□□□ 0.73
TM4SF4P48230 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TM4SF4P48230 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF4P48230 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF4P48230 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.6■□□□□ 0.73
TM4SF4P48230 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC19.6■□□□□ 0.73
TM4SF4P48230 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC19.6■□□□□ 0.73
TM4SF4P48230 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.6■□□□□ 0.73
TM4SF4P48230 RARRES2P9-201ENST00000565168 469 ntBASIC19.6■□□□□ 0.73
TM4SF4P48230 AC104794.3-201ENST00000566840 1248 ntBASIC19.6■□□□□ 0.73
TM4SF4P48230 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.6■□□□□ 0.73
TM4SF4P48230 AC106886.1-201ENST00000568660 600 ntBASIC19.6■□□□□ 0.73
TM4SF4P48230 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.6■□□□□ 0.73
TM4SF4P48230 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF4P48230 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TM4SF4P48230 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF4P48230 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF4P48230 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF4P48230 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TM4SF4P48230 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.6■□□□□ 0.73
TM4SF4P48230 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF4P48230 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF4P48230 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TM4SF4P48230 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TM4SF4P48230 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF4P48230 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.59■□□□□ 0.73
TM4SF4P48230 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TM4SF4P48230 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TM4SF4P48230 INE1-201ENST00000456273 945 ntBASIC19.59■□□□□ 0.73
TM4SF4P48230 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.59■□□□□ 0.73
TM4SF4P48230 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
TM4SF4P48230 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.59■□□□□ 0.73
TM4SF4P48230 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TM4SF4P48230 AL138918.1-201ENST00000568306 659 ntBASIC19.59■□□□□ 0.73
TM4SF4P48230 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms