Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
SLC1A3P43003 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.04■□□□□ 0.16
SLC1A3P43003 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
SLC1A3P43003 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A3P43003 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.04■□□□□ 0.16
SLC1A3P43003 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.04■□□□□ 0.16
SLC1A3P43003 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
SLC1A3P43003 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A3P43003 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A3P43003 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC1A3P43003 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A3P43003 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A3P43003 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC1A3P43003 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A3P43003 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC1A3P43003 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC1A3P43003 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
SLC1A3P43003 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A3P43003 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
SLC1A3P43003 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A3P43003 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A3P43003 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A3P43003 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A3P43003 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A3P43003 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.03■□□□□ 0.16
SLC1A3P43003 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SLC1A3P43003 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC1A3P43003 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A3P43003 AP002383.4-201ENST00000442518 975 ntBASIC16.03■□□□□ 0.16
SLC1A3P43003 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.03■□□□□ 0.16
SLC1A3P43003 AC122714.2-201ENST00000502787 707 ntBASIC16.03■□□□□ 0.16
SLC1A3P43003 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.03■□□□□ 0.16
SLC1A3P43003 AC009533.2-201ENST00000543664 586 ntBASIC16.03■□□□□ 0.16
SLC1A3P43003 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
SLC1A3P43003 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.03■□□□□ 0.16
SLC1A3P43003 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.03■□□□□ 0.16
SLC1A3P43003 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SLC1A3P43003 Z69720.1-201ENST00000601483 472 ntBASIC16.03■□□□□ 0.16
SLC1A3P43003 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC1A3P43003 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.03■□□□□ 0.16
SLC1A3P43003 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
SLC1A3P43003 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
SLC1A3P43003 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A3P43003 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SLC1A3P43003 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.03■□□□□ 0.16
SLC1A3P43003 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC1A3P43003 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.03■□□□□ 0.16
SLC1A3P43003 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC1A3P43003 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
SLC1A3P43003 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A3P43003 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.03■□□□□ 0.16
SLC1A3P43003 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SLC1A3P43003 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A3P43003 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A3P43003 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC1A3P43003 AC233702.3-201ENST00000578656 1387 ntBASIC16.02■□□□□ 0.16
SLC1A3P43003 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A3P43003 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A3P43003 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A3P43003 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A3P43003 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A3P43003 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A3P43003 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC1A3P43003 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A3P43003 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A3P43003 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A3P43003 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A3P43003 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A3P43003 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC1A3P43003 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A3P43003 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A3P43003 FAM220CP-201ENST00000395253 831 ntBASIC16.02■□□□□ 0.16
SLC1A3P43003 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC1A3P43003 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.02■□□□□ 0.16
SLC1A3P43003 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC1A3P43003 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SLC1A3P43003 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC1A3P43003 TPSP2-201ENST00000561760 610 ntBASIC16.02■□□□□ 0.16
SLC1A3P43003 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC1A3P43003 AP002414.4-201ENST00000589764 1148 ntBASIC16.02■□□□□ 0.16
SLC1A3P43003 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC1A3P43003 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
SLC1A3P43003 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.02■□□□□ 0.16
SLC1A3P43003 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC1A3P43003 AC069148.1-201ENST00000608741 768 ntBASIC16.02■□□□□ 0.16
SLC1A3P43003 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.02■□□□□ 0.16
SLC1A3P43003 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.02■□□□□ 0.16
SLC1A3P43003 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms