Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V1AP38606 DUX4L17-201ENST00000557360 1267 ntBASIC22.03■■□□□ 1.12
ATP6V1AP38606 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC22.03■■□□□ 1.12
ATP6V1AP38606 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V1AP38606 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V1AP38606 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V1AP38606 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V1AP38606 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V1AP38606 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ATP6V1AP38606 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC22.03■■□□□ 1.12
ATP6V1AP38606 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V1AP38606 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC22.02■■□□□ 1.12
ATP6V1AP38606 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC22.02■■□□□ 1.12
ATP6V1AP38606 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V1AP38606 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
ATP6V1AP38606 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V1AP38606 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC22.02■■□□□ 1.12
ATP6V1AP38606 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V1AP38606 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V1AP38606 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V1AP38606 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V1AP38606 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V1AP38606 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V1AP38606 RPL30-202ENST00000396070 440 ntTSL 2 BASIC22.02■■□□□ 1.12
ATP6V1AP38606 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
ATP6V1AP38606 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC22.02■■□□□ 1.12
ATP6V1AP38606 RBM7-207ENST00000544582 692 ntTSL 3 BASIC22.02■■□□□ 1.12
ATP6V1AP38606 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC22.02■■□□□ 1.12
ATP6V1AP38606 RARRES2P8-201ENST00000566335 367 ntBASIC22.02■■□□□ 1.12
ATP6V1AP38606 NAA60-208ENST00000570819 833 ntTSL 2 BASIC22.02■■□□□ 1.12
ATP6V1AP38606 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC22.02■■□□□ 1.12
ATP6V1AP38606 AP001059.3-201ENST00000619053 235 ntBASIC22.02■■□□□ 1.12
ATP6V1AP38606 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V1AP38606 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
ATP6V1AP38606 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V1AP38606 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V1AP38606 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ATP6V1AP38606 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
ATP6V1AP38606 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
ATP6V1AP38606 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
ATP6V1AP38606 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V1AP38606 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V1AP38606 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC22.01■■□□□ 1.11
ATP6V1AP38606 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V1AP38606 CENPM-205ENST00000404067 905 ntTSL 3 BASIC22.01■■□□□ 1.11
ATP6V1AP38606 AC005034.1-201ENST00000426657 489 ntBASIC22.01■■□□□ 1.11
ATP6V1AP38606 AC002472.2-201ENST00000442739 958 ntBASIC22.01■■□□□ 1.11
ATP6V1AP38606 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC22.01■■□□□ 1.11
ATP6V1AP38606 KLF2P3-201ENST00000451977 1087 ntBASIC22.01■■□□□ 1.11
ATP6V1AP38606 THTPA-204ENST00000554970 569 ntTSL 4 BASIC22.01■■□□□ 1.11
ATP6V1AP38606 THTPA-206ENST00000556015 535 ntTSL 3 BASIC22.01■■□□□ 1.11
ATP6V1AP38606 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V1AP38606 CD7-202ENST00000578509 925 ntTSL 3 BASIC22.01■■□□□ 1.11
ATP6V1AP38606 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC22.01■■□□□ 1.11
ATP6V1AP38606 AL035252.4-201ENST00000624174 288 ntBASIC22.01■■□□□ 1.11
ATP6V1AP38606 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V1AP38606 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
ATP6V1AP38606 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V1AP38606 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
ATP6V1AP38606 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V1AP38606 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
ATP6V1AP38606 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V1AP38606 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC22.01■■□□□ 1.11
ATP6V1AP38606 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC22.01■■□□□ 1.11
ATP6V1AP38606 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC22.01■■□□□ 1.11
ATP6V1AP38606 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ATP6V1AP38606 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC22.01■■□□□ 1.11
ATP6V1AP38606 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC22.01■■□□□ 1.11
ATP6V1AP38606 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC22.01■■□□□ 1.11
ATP6V1AP38606 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC22■■□□□ 1.11
ATP6V1AP38606 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
ATP6V1AP38606 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V1AP38606 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC22■■□□□ 1.11
ATP6V1AP38606 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC22■■□□□ 1.11
ATP6V1AP38606 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V1AP38606 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC22■■□□□ 1.11
ATP6V1AP38606 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC22■■□□□ 1.11
ATP6V1AP38606 COPE-202ENST00000349893 948 ntTSL 2 BASIC22■■□□□ 1.11
ATP6V1AP38606 RBPMS2P1-201ENST00000437762 623 ntBASIC22■■□□□ 1.11
ATP6V1AP38606 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC22■■□□□ 1.11
ATP6V1AP38606 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC22■■□□□ 1.11
ATP6V1AP38606 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC22■■□□□ 1.11
ATP6V1AP38606 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC22■■□□□ 1.11
ATP6V1AP38606 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC22■■□□□ 1.11
ATP6V1AP38606 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC22■■□□□ 1.11
ATP6V1AP38606 RN7SL204P-201ENST00000582831 262 ntBASIC22■■□□□ 1.11
ATP6V1AP38606 MIR4515-201ENST00000584082 81 ntBASIC22■■□□□ 1.11
ATP6V1AP38606 AP000974.1-201ENST00000623909 2387 ntBASIC22■■□□□ 1.11
ATP6V1AP38606 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC22■■□□□ 1.11
ATP6V1AP38606 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC22■■□□□ 1.11
ATP6V1AP38606 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC22■■□□□ 1.11
ATP6V1AP38606 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
ATP6V1AP38606 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC22■■□□□ 1.11
ATP6V1AP38606 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
ATP6V1AP38606 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC22■■□□□ 1.11
ATP6V1AP38606 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC22■■□□□ 1.11
ATP6V1AP38606 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC22■■□□□ 1.11
ATP6V1AP38606 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V1AP38606 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATP6V1AP38606 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms