Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC1P35251 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.37■□□□□ 0.53
RFC1P35251 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RFC1P35251 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC1P35251 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.37■□□□□ 0.53
RFC1P35251 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RFC1P35251 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC1P35251 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC1P35251 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC1P35251 MYCLP1-201ENST00000372451 1075 ntBASIC18.37■□□□□ 0.53
RFC1P35251 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RFC1P35251 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.37■□□□□ 0.53
RFC1P35251 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.37■□□□□ 0.53
RFC1P35251 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.37■□□□□ 0.53
RFC1P35251 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RFC1P35251 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.37■□□□□ 0.53
RFC1P35251 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC1P35251 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC1P35251 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.37■□□□□ 0.53
RFC1P35251 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
RFC1P35251 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.37■□□□□ 0.53
RFC1P35251 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC1P35251 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC1P35251 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC1P35251 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
RFC1P35251 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC1P35251 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC1P35251 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC1P35251 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC1P35251 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC1P35251 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RFC1P35251 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC1P35251 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC1P35251 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC1P35251 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC1P35251 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC1P35251 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC1P35251 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC1P35251 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.36■□□□□ 0.53
RFC1P35251 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RFC1P35251 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
RFC1P35251 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC1P35251 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RFC1P35251 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.36■□□□□ 0.53
RFC1P35251 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.36■□□□□ 0.53
RFC1P35251 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.36■□□□□ 0.53
RFC1P35251 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC1P35251 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.36■□□□□ 0.53
RFC1P35251 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.36■□□□□ 0.53
RFC1P35251 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC1P35251 AC016396.2-201ENST00000562575 1417 ntBASIC18.36■□□□□ 0.53
RFC1P35251 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
RFC1P35251 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC1P35251 AC099336.1-202ENST00000602961 463 ntBASIC18.36■□□□□ 0.53
RFC1P35251 AD001527.2-201ENST00000622994 785 ntBASIC18.36■□□□□ 0.53
RFC1P35251 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.36■□□□□ 0.53
RFC1P35251 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RFC1P35251 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RFC1P35251 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.36■□□□□ 0.53
RFC1P35251 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC1P35251 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RFC1P35251 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFC1P35251 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFC1P35251 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC1P35251 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC1P35251 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.35■□□□□ 0.53
RFC1P35251 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.35■□□□□ 0.53
RFC1P35251 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.35■□□□□ 0.53
RFC1P35251 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RFC1P35251 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC1P35251 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.35■□□□□ 0.53
RFC1P35251 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFC1P35251 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.35■□□□□ 0.53
RFC1P35251 AC111152.3-201ENST00000569699 673 ntBASIC18.35■□□□□ 0.53
RFC1P35251 STK25P1-201ENST00000585406 838 ntBASIC18.35■□□□□ 0.53
RFC1P35251 AC114341.1-201ENST00000618070 349 ntBASIC18.35■□□□□ 0.53
RFC1P35251 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.35■□□□□ 0.53
RFC1P35251 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.35■□□□□ 0.53
RFC1P35251 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.35■□□□□ 0.53
RFC1P35251 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RFC1P35251 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RFC1P35251 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC1P35251 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC1P35251 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.35■□□□□ 0.53
RFC1P35251 AC132938.5-201ENST00000624980 1813 ntBASIC18.35■□□□□ 0.53
RFC1P35251 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RFC1P35251 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RFC1P35251 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC1P35251 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.34■□□□□ 0.53
RFC1P35251 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RFC1P35251 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms