Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC046185.3-201ENST00000623228 1824 ntBASIC18.37■□□□□ 0.53
KRT3P12035 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT3P12035 AP001094.4-201ENST00000579008 2176 ntBASIC18.37■□□□□ 0.53
KRT3P12035 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRT3P12035 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.36■□□□□ 0.53
KRT3P12035 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
KRT3P12035 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT3P12035 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.36■□□□□ 0.53
KRT3P12035 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT3P12035 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT3P12035 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
KRT3P12035 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT3P12035 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT3P12035 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.36■□□□□ 0.53
KRT3P12035 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT3P12035 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
KRT3P12035 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT3P12035 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT3P12035 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT3P12035 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.36■□□□□ 0.53
KRT3P12035 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT3P12035 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT3P12035 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT3P12035 AC020916.1-201ENST00000587762 1774 ntBASIC18.36■□□□□ 0.53
KRT3P12035 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
KRT3P12035 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT3P12035 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT3P12035 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.36■□□□□ 0.53
KRT3P12035 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT3P12035 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
KRT3P12035 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.36■□□□□ 0.53
KRT3P12035 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
KRT3P12035 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT3P12035 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
KRT3P12035 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KRT3P12035 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KRT3P12035 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.35■□□□□ 0.53
KRT3P12035 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.35■□□□□ 0.53
KRT3P12035 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.35■□□□□ 0.53
KRT3P12035 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.35■□□□□ 0.53
KRT3P12035 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.35■□□□□ 0.53
KRT3P12035 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.35■□□□□ 0.53
KRT3P12035 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
KRT3P12035 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
KRT3P12035 AC132938.5-201ENST00000624980 1813 ntBASIC18.35■□□□□ 0.53
KRT3P12035 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT3P12035 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
KRT3P12035 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
KRT3P12035 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.35■□□□□ 0.53
KRT3P12035 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT3P12035 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT3P12035 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
KRT3P12035 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
KRT3P12035 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT3P12035 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT3P12035 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT3P12035 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
KRT3P12035 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.34■□□□□ 0.53
KRT3P12035 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT3P12035 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT3P12035 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT3P12035 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT3P12035 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT3P12035 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT3P12035 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.34■□□□□ 0.53
KRT3P12035 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
KRT3P12035 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
KRT3P12035 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
KRT3P12035 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.34■□□□□ 0.53
KRT3P12035 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.34■□□□□ 0.53
KRT3P12035 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT3P12035 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.34■□□□□ 0.53
KRT3P12035 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
KRT3P12035 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.34■□□□□ 0.53
KRT3P12035 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.34■□□□□ 0.53
KRT3P12035 STK19B-204ENST00000512515 211 ntBASIC18.34■□□□□ 0.53
KRT3P12035 MIR5100-201ENST00000579544 119 ntBASIC18.34■□□□□ 0.53
KRT3P12035 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
KRT3P12035 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
KRT3P12035 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.34■□□□□ 0.53
KRT3P12035 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms