Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCNYL3P0C7X3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCNYL3P0C7X3 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.85■□□□□ 0.29
CCNYL3P0C7X3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CCNYL3P0C7X3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCNYL3P0C7X3 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.85■□□□□ 0.29
CCNYL3P0C7X3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCNYL3P0C7X3 HLA-J-201ENST00000462773 1622 ntBASIC16.85■□□□□ 0.29
CCNYL3P0C7X3 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCNYL3P0C7X3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCNYL3P0C7X3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCNYL3P0C7X3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 KRT18P13-201ENST00000400056 1290 ntBASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 HNRNPDP1-201ENST00000439535 754 ntBASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 SART3-203ENST00000546611 1184 ntBASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 AL049840.3-201ENST00000602669 611 ntBASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 AL671883.3-201ENST00000603274 991 ntBASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 AC022898.2-201ENST00000616822 1312 ntBASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCNYL3P0C7X3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CCNYL3P0C7X3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.83■□□□□ 0.29
CCNYL3P0C7X3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCNYL3P0C7X3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCNYL3P0C7X3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCNYL3P0C7X3 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 MIR940-201ENST00000401276 94 ntBASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 RPS2P1-201ENST00000434010 821 ntBASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 MIR7706-201ENST00000613747 67 ntBASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCNYL3P0C7X3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL3P0C7X3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL3P0C7X3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL3P0C7X3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL3P0C7X3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL3P0C7X3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNYL3P0C7X3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
CCNYL3P0C7X3 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL3P0C7X3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL3P0C7X3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCNYL3P0C7X3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCNYL3P0C7X3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.82■□□□□ 0.28
CCNYL3P0C7X3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms