Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.87■□□□□ 0.45
TOP3BO95985 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TOP3BO95985 AC116407.3-201ENST00000623905 1129 ntBASIC17.87■□□□□ 0.45
TOP3BO95985 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.87■□□□□ 0.45
TOP3BO95985 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.87■□□□□ 0.45
TOP3BO95985 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TOP3BO95985 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TOP3BO95985 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TOP3BO95985 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TOP3BO95985 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TOP3BO95985 AL023806.1-201ENST00000603994 1649 ntBASIC17.87■□□□□ 0.45
TOP3BO95985 AC090340.1-201ENST00000620778 4980 ntBASIC17.86■□□□□ 0.45
TOP3BO95985 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.86■□□□□ 0.45
TOP3BO95985 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.86■□□□□ 0.45
TOP3BO95985 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TOP3BO95985 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TOP3BO95985 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 BCL2-203ENST00000589955 5011 ntBASIC17.86■□□□□ 0.45
TOP3BO95985 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.86■□□□□ 0.45
TOP3BO95985 HNRNPDP1-201ENST00000439535 754 ntBASIC17.86■□□□□ 0.45
TOP3BO95985 RN7SL606P-201ENST00000472779 293 ntBASIC17.86■□□□□ 0.45
TOP3BO95985 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.86■□□□□ 0.45
TOP3BO95985 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.86■□□□□ 0.45
TOP3BO95985 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.86■□□□□ 0.45
TOP3BO95985 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.86■□□□□ 0.45
TOP3BO95985 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 FAM215A-202ENST00000632077 792 ntBASIC17.86■□□□□ 0.45
TOP3BO95985 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TOP3BO95985 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.86■□□□□ 0.45
TOP3BO95985 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.86■□□□□ 0.45
TOP3BO95985 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TOP3BO95985 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TOP3BO95985 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
TOP3BO95985 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TOP3BO95985 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TOP3BO95985 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP3BO95985 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP3BO95985 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP3BO95985 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.85■□□□□ 0.45
TOP3BO95985 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TOP3BO95985 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.85■□□□□ 0.45
TOP3BO95985 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP3BO95985 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP3BO95985 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.85■□□□□ 0.45
TOP3BO95985 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP3BO95985 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TOP3BO95985 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP3BO95985 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.85■□□□□ 0.45
TOP3BO95985 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TOP3BO95985 MINOS1P3-201ENST00000457048 203 ntBASIC17.85■□□□□ 0.45
TOP3BO95985 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.85■□□□□ 0.45
TOP3BO95985 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.85■□□□□ 0.45
TOP3BO95985 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TOP3BO95985 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.85■□□□□ 0.45
TOP3BO95985 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.85■□□□□ 0.45
TOP3BO95985 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
TOP3BO95985 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP3BO95985 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TOP3BO95985 AC011676.5-201ENST00000624864 2660 ntBASIC17.85■□□□□ 0.45
TOP3BO95985 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TOP3BO95985 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.85■□□□□ 0.45
TOP3BO95985 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.85■□□□□ 0.45
TOP3BO95985 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP3BO95985 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TOP3BO95985 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP3BO95985 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TOP3BO95985 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.85■□□□□ 0.45
TOP3BO95985 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TOP3BO95985 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.84■□□□□ 0.45
TOP3BO95985 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.84■□□□□ 0.45
TOP3BO95985 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.84■□□□□ 0.45
TOP3BO95985 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.84■□□□□ 0.45
TOP3BO95985 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP3BO95985 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.84■□□□□ 0.45
TOP3BO95985 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.84■□□□□ 0.45
TOP3BO95985 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP3BO95985 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TOP3BO95985 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.84■□□□□ 0.45
TOP3BO95985 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
TOP3BO95985 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.84■□□□□ 0.45
TOP3BO95985 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TOP3BO95985 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms