Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB2O95900 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB2O95900 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.24■□□□□ 0.51
TRUB2O95900 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB2O95900 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB2O95900 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.24■□□□□ 0.51
TRUB2O95900 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB2O95900 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB2O95900 AC079781.3-201ENST00000449110 356 ntBASIC18.24■□□□□ 0.51
TRUB2O95900 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
TRUB2O95900 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.24■□□□□ 0.51
TRUB2O95900 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.24■□□□□ 0.51
TRUB2O95900 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.24■□□□□ 0.51
TRUB2O95900 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.24■□□□□ 0.51
TRUB2O95900 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
TRUB2O95900 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB2O95900 AL121912.1-201ENST00000603683 238 ntBASIC18.24■□□□□ 0.51
TRUB2O95900 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.24■□□□□ 0.51
TRUB2O95900 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.24■□□□□ 0.51
TRUB2O95900 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.24■□□□□ 0.51
TRUB2O95900 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB2O95900 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.24■□□□□ 0.51
TRUB2O95900 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB2O95900 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.24■□□□□ 0.51
TRUB2O95900 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB2O95900 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
TRUB2O95900 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.23■□□□□ 0.51
TRUB2O95900 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
TRUB2O95900 AC079776.2-201ENST00000641154 1609 ntBASIC18.23■□□□□ 0.51
TRUB2O95900 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.23■□□□□ 0.51
TRUB2O95900 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
TRUB2O95900 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.23■□□□□ 0.51
TRUB2O95900 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB2O95900 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC18.23■□□□□ 0.51
TRUB2O95900 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB2O95900 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB2O95900 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB2O95900 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB2O95900 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB2O95900 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.23■□□□□ 0.51
TRUB2O95900 SPDYE21P-201ENST00000413323 827 ntBASIC18.23■□□□□ 0.51
TRUB2O95900 STK19B-204ENST00000512515 211 ntBASIC18.23■□□□□ 0.51
TRUB2O95900 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.23■□□□□ 0.51
TRUB2O95900 AL121894.2-201ENST00000602977 491 ntBASIC18.23■□□□□ 0.51
TRUB2O95900 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.23■□□□□ 0.51
TRUB2O95900 AL031008.1-201ENST00000619963 541 ntBASIC18.23■□□□□ 0.51
TRUB2O95900 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB2O95900 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB2O95900 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB2O95900 SIGLEC16-201ENST00000599858 1437 ntBASIC18.23■□□□□ 0.51
TRUB2O95900 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
TRUB2O95900 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
TRUB2O95900 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.22■□□□□ 0.51
TRUB2O95900 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRUB2O95900 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC18.22■□□□□ 0.51
TRUB2O95900 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.22■□□□□ 0.51
TRUB2O95900 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.22■□□□□ 0.51
TRUB2O95900 AL356309.3-201ENST00000624132 1934 ntBASIC18.22■□□□□ 0.51
TRUB2O95900 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRUB2O95900 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.22■□□□□ 0.51
TRUB2O95900 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
TRUB2O95900 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.22■□□□□ 0.51
TRUB2O95900 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.22■□□□□ 0.51
TRUB2O95900 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.22■□□□□ 0.51
TRUB2O95900 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.22■□□□□ 0.51
TRUB2O95900 AC073592.4-201ENST00000623827 446 ntBASIC18.22■□□□□ 0.51
TRUB2O95900 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.22■□□□□ 0.51
TRUB2O95900 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
TRUB2O95900 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.22■□□□□ 0.51
TRUB2O95900 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.22■□□□□ 0.51
TRUB2O95900 AC116353.5-201ENST00000638148 1699 ntBASIC18.22■□□□□ 0.51
TRUB2O95900 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRUB2O95900 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB2O95900 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB2O95900 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
TRUB2O95900 AC009336.1-201ENST00000608941 1553 ntBASIC18.21■□□□□ 0.51
TRUB2O95900 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRUB2O95900 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.21■□□□□ 0.51
TRUB2O95900 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms