Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD4O95243 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD4O95243 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD4O95243 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD4O95243 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
MBD4O95243 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.73■□□□□ 0.91
MBD4O95243 PTCHD3P3-201ENST00000403073 906 ntBASIC20.73■□□□□ 0.91
MBD4O95243 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.73■□□□□ 0.91
MBD4O95243 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD4O95243 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.73■□□□□ 0.91
MBD4O95243 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
MBD4O95243 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD4O95243 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD4O95243 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD4O95243 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD4O95243 GPR89P-201ENST00000407924 1495 ntBASIC20.73■□□□□ 0.91
MBD4O95243 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.73■□□□□ 0.91
MBD4O95243 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.73■□□□□ 0.91
MBD4O95243 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD4O95243 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.73■□□□□ 0.91
MBD4O95243 AL590787.1-201ENST00000568856 1315 ntBASIC20.73■□□□□ 0.91
MBD4O95243 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.73■□□□□ 0.91
MBD4O95243 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
MBD4O95243 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
MBD4O95243 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
MBD4O95243 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
MBD4O95243 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.72■□□□□ 0.91
MBD4O95243 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.72■□□□□ 0.91
MBD4O95243 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
MBD4O95243 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
MBD4O95243 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD4O95243 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MBD4O95243 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.72■□□□□ 0.91
MBD4O95243 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
MBD4O95243 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MBD4O95243 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD4O95243 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD4O95243 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD4O95243 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
MBD4O95243 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.72■□□□□ 0.91
MBD4O95243 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.72■□□□□ 0.91
MBD4O95243 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.72■□□□□ 0.91
MBD4O95243 PGM5P2-202ENST00000637225 1043 ntBASIC20.72■□□□□ 0.91
MBD4O95243 AL805961.1-202ENST00000641562 540 ntBASIC20.72■□□□□ 0.91
MBD4O95243 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD4O95243 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MBD4O95243 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD4O95243 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.72■□□□□ 0.91
MBD4O95243 LINC00896-202ENST00000609602 2128 ntBASIC20.72■□□□□ 0.91
MBD4O95243 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD4O95243 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.72■□□□□ 0.91
MBD4O95243 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
MBD4O95243 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MBD4O95243 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD4O95243 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.72■□□□□ 0.91
MBD4O95243 ZNF259P1-201ENST00000407656 1365 ntBASIC20.72■□□□□ 0.91
MBD4O95243 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC20.72■□□□□ 0.91
MBD4O95243 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.71■□□□□ 0.91
MBD4O95243 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD4O95243 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD4O95243 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.71■□□□□ 0.91
MBD4O95243 HCG11-201ENST00000411553 5696 ntBASIC20.71■□□□□ 0.91
MBD4O95243 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MBD4O95243 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.71■□□□□ 0.91
MBD4O95243 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
MBD4O95243 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD4O95243 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD4O95243 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.71■□□□□ 0.91
MBD4O95243 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD4O95243 AC108751.1-201ENST00000490852 363 ntBASIC20.71■□□□□ 0.91
MBD4O95243 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MBD4O95243 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MBD4O95243 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.71■□□□□ 0.91
MBD4O95243 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.71■□□□□ 0.91
MBD4O95243 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD4O95243 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.71■□□□□ 0.91
MBD4O95243 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD4O95243 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
MBD4O95243 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.71■□□□□ 0.91
MBD4O95243 AL138688.1-201ENST00000624851 1594 ntBASIC20.71■□□□□ 0.91
MBD4O95243 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD4O95243 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD4O95243 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.71■□□□□ 0.91
MBD4O95243 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.71■□□□□ 0.91
MBD4O95243 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
MBD4O95243 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
MBD4O95243 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
MBD4O95243 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
MBD4O95243 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.7■□□□□ 0.9
MBD4O95243 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.7■□□□□ 0.9
MBD4O95243 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
MBD4O95243 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC20.7■□□□□ 0.9
MBD4O95243 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.7■□□□□ 0.9
MBD4O95243 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms