Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 AC012313.1-201ENST00000593393 3059 ntBASIC17.39■□□□□ 0.37
NDUFS3O75489 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
NDUFS3O75489 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS3O75489 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.38■□□□□ 0.37
NDUFS3O75489 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.38■□□□□ 0.37
NDUFS3O75489 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS3O75489 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS3O75489 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NDUFS3O75489 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.38■□□□□ 0.37
NDUFS3O75489 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.38■□□□□ 0.37
NDUFS3O75489 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS3O75489 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS3O75489 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS3O75489 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS3O75489 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.38■□□□□ 0.37
NDUFS3O75489 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NDUFS3O75489 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.38■□□□□ 0.37
NDUFS3O75489 AC012615.1-201ENST00000565797 1299 ntBASIC17.38■□□□□ 0.37
NDUFS3O75489 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.38■□□□□ 0.37
NDUFS3O75489 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.38■□□□□ 0.37
NDUFS3O75489 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.38■□□□□ 0.37
NDUFS3O75489 BNIP3P18-201ENST00000593976 575 ntBASIC17.38■□□□□ 0.37
NDUFS3O75489 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NDUFS3O75489 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NDUFS3O75489 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
NDUFS3O75489 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.38■□□□□ 0.37
NDUFS3O75489 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.38■□□□□ 0.37
NDUFS3O75489 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.37■□□□□ 0.37
NDUFS3O75489 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.37■□□□□ 0.37
NDUFS3O75489 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NDUFS3O75489 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.37■□□□□ 0.37
NDUFS3O75489 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NDUFS3O75489 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NDUFS3O75489 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NDUFS3O75489 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
NDUFS3O75489 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.37■□□□□ 0.37
NDUFS3O75489 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
NDUFS3O75489 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.37■□□□□ 0.37
NDUFS3O75489 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.37■□□□□ 0.37
NDUFS3O75489 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
NDUFS3O75489 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.37■□□□□ 0.37
NDUFS3O75489 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NDUFS3O75489 AC046185.3-201ENST00000623228 1824 ntBASIC17.37■□□□□ 0.37
NDUFS3O75489 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.37■□□□□ 0.37
NDUFS3O75489 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NDUFS3O75489 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.37■□□□□ 0.37
NDUFS3O75489 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
NDUFS3O75489 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NDUFS3O75489 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NDUFS3O75489 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFS3O75489 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFS3O75489 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFS3O75489 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFS3O75489 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFS3O75489 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NDUFS3O75489 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFS3O75489 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFS3O75489 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFS3O75489 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFS3O75489 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFS3O75489 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFS3O75489 RCN1P2-201ENST00000398357 915 ntBASIC17.36■□□□□ 0.37
NDUFS3O75489 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.36■□□□□ 0.37
NDUFS3O75489 POM121L3P-201ENST00000419331 1163 ntBASIC17.36■□□□□ 0.37
NDUFS3O75489 UPK3BP1-201ENST00000428678 509 ntBASIC17.36■□□□□ 0.37
NDUFS3O75489 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFS3O75489 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.36■□□□□ 0.37
NDUFS3O75489 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.36■□□□□ 0.37
NDUFS3O75489 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.36■□□□□ 0.37
NDUFS3O75489 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.36■□□□□ 0.37
NDUFS3O75489 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.36■□□□□ 0.37
NDUFS3O75489 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFS3O75489 AC099336.1-202ENST00000602961 463 ntBASIC17.36■□□□□ 0.37
NDUFS3O75489 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.36■□□□□ 0.37
NDUFS3O75489 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFS3O75489 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.36■□□□□ 0.37
NDUFS3O75489 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFS3O75489 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFS3O75489 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFS3O75489 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NDUFS3O75489 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.36■□□□□ 0.37
NDUFS3O75489 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms