Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRCH4O75427 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.12■□□□□ 0.49
LRCH4O75427 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
LRCH4O75427 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRCH4O75427 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LRCH4O75427 AC092053.1-201ENST00000605787 1936 ntBASIC18.11■□□□□ 0.49
LRCH4O75427 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRCH4O75427 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRCH4O75427 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRCH4O75427 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.11■□□□□ 0.49
LRCH4O75427 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LRCH4O75427 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRCH4O75427 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRCH4O75427 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
LRCH4O75427 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.11■□□□□ 0.49
LRCH4O75427 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.11■□□□□ 0.49
LRCH4O75427 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.11■□□□□ 0.49
LRCH4O75427 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRCH4O75427 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LRCH4O75427 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRCH4O75427 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.11■□□□□ 0.49
LRCH4O75427 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRCH4O75427 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.11■□□□□ 0.49
LRCH4O75427 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.11■□□□□ 0.49
LRCH4O75427 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.11■□□□□ 0.49
LRCH4O75427 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.11■□□□□ 0.49
LRCH4O75427 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.11■□□□□ 0.49
LRCH4O75427 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRCH4O75427 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRCH4O75427 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRCH4O75427 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
LRCH4O75427 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRCH4O75427 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRCH4O75427 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.11■□□□□ 0.49
LRCH4O75427 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRCH4O75427 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRCH4O75427 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH4O75427 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH4O75427 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH4O75427 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH4O75427 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH4O75427 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH4O75427 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH4O75427 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.1■□□□□ 0.49
LRCH4O75427 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH4O75427 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRCH4O75427 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.1■□□□□ 0.49
LRCH4O75427 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH4O75427 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.1■□□□□ 0.49
LRCH4O75427 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.1■□□□□ 0.49
LRCH4O75427 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRCH4O75427 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
LRCH4O75427 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH4O75427 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.1■□□□□ 0.49
LRCH4O75427 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.1■□□□□ 0.49
LRCH4O75427 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LRCH4O75427 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
LRCH4O75427 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH4O75427 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LRCH4O75427 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.1■□□□□ 0.49
LRCH4O75427 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LRCH4O75427 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.1■□□□□ 0.49
LRCH4O75427 ABCD1P5-201ENST00000445663 754 ntBASIC18.1■□□□□ 0.49
LRCH4O75427 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LRCH4O75427 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.1■□□□□ 0.49
LRCH4O75427 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH4O75427 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.1■□□□□ 0.49
LRCH4O75427 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRCH4O75427 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH4O75427 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH4O75427 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRCH4O75427 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
LRCH4O75427 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH4O75427 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH4O75427 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LRCH4O75427 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH4O75427 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
LRCH4O75427 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.09■□□□□ 0.49
LRCH4O75427 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LRCH4O75427 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH4O75427 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH4O75427 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.09■□□□□ 0.49
LRCH4O75427 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH4O75427 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH4O75427 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH4O75427 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LRCH4O75427 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LRCH4O75427 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.09■□□□□ 0.49
LRCH4O75427 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH4O75427 SPDYE21P-201ENST00000413323 827 ntBASIC18.09■□□□□ 0.49
LRCH4O75427 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.09■□□□□ 0.49
LRCH4O75427 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.09■□□□□ 0.49
LRCH4O75427 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH4O75427 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.09■□□□□ 0.49
LRCH4O75427 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.09■□□□□ 0.49
LRCH4O75427 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.09■□□□□ 0.49
LRCH4O75427 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.09■□□□□ 0.49
LRCH4O75427 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRCH4O75427 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.09■□□□□ 0.49
LRCH4O75427 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms