Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 PMPCAP1-201ENST00000508114 1576 ntBASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 AC103564.2-201ENST00000432853 1299 ntBASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 AC098831.1-202ENST00000438821 336 ntBASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 DDX43P3-201ENST00000441064 443 ntBASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 AC008735.5-201ENST00000623544 497 ntBASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 AC012317.2-201ENST00000623305 2251 ntBASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 AC009949.1-201ENST00000623048 1830 ntBASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 AL133373.2-201ENST00000623187 2828 ntBASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.89■□□□□ 0.13
NPIPA3F8WFD2 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 AC079776.2-201ENST00000641154 1609 ntBASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 AC107918.4-202ENST00000641623 219 ntBASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 AC134043.2-201ENST00000624206 2238 ntBASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 PMS2P7-201ENST00000506558 1336 ntBASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
NPIPA3F8WFD2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 NFIC-211ENST00000641145 8399 ntBASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 AC068880.1-201ENST00000507289 2297 ntBASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 COX5BP2-201ENST00000392354 334 ntBASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 KRT18P13-201ENST00000400056 1290 ntBASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 IGHV3-22-201ENST00000520721 359 ntBASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 AC092865.5-201ENST00000545435 363 ntBASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 AC105339.3-201ENST00000560043 636 ntBASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 AD001527.2-201ENST00000622994 785 ntBASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NPIPA3F8WFD2 AL022326.1-202ENST00000641533 845 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms