Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCA3PQ9Y6N3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 IFNL4P1-201ENST00000607083 540 ntBASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCA3PQ9Y6N3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLCA3PQ9Y6N3 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLCA3PQ9Y6N3 OR6D1P-203ENST00000641209 4860 ntBASIC16.52■□□□□ 0.23
CLCA3PQ9Y6N3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLCA3PQ9Y6N3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLCA3PQ9Y6N3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLCA3PQ9Y6N3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLCA3PQ9Y6N3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CLCA3PQ9Y6N3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CLCA3PQ9Y6N3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
CLCA3PQ9Y6N3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CLCA3PQ9Y6N3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCA3PQ9Y6N3 AC012317.2-201ENST00000623305 2251 ntBASIC16.5■□□□□ 0.23
CLCA3PQ9Y6N3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCA3PQ9Y6N3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCA3PQ9Y6N3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCA3PQ9Y6N3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCA3PQ9Y6N3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCA3PQ9Y6N3 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCA3PQ9Y6N3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CLCA3PQ9Y6N3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCA3PQ9Y6N3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CLCA3PQ9Y6N3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CLCA3PQ9Y6N3 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.5■□□□□ 0.23
CLCA3PQ9Y6N3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCA3PQ9Y6N3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCA3PQ9Y6N3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCA3PQ9Y6N3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCA3PQ9Y6N3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCA3PQ9Y6N3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCA3PQ9Y6N3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms