Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 PCDHB18P-201ENST00000524813 2368 ntBASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 HCG4B-203ENST00000450128 991 ntBASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 MIR4751-201ENST00000578027 74 ntBASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 AC100803.2-201ENST00000562459 1963 ntBASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.05■□□□□ 0.32
CSNK1G3Q9Y6M4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 GGTLC5P-201ENST00000617623 998 ntBASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.04■□□□□ 0.32
CSNK1G3Q9Y6M4 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 AP002414.1-201ENST00000391405 1147 ntBASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 AC005829.1-201ENST00000570002 483 ntBASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 AL353135.1-201ENST00000606729 504 ntBASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 AC010654.1-201ENST00000615722 808 ntBASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 AC004790.2-201ENST00000623588 572 ntBASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 AC134684.3-201ENST00000641758 218 ntBASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CSNK1G3Q9Y6M4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms