Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
PCDHA4Q9UN74 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
PCDHA4Q9UN74 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 AC021087.4-201ENST00000563761 564 ntBASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 PAM16-208ENST00000573553 722 ntTSL 2 BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 AC097637.2-201ENST00000624096 1997 ntBASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 TP73-AS1-207ENST00000624167 988 ntBASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PCDHA4Q9UN74 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 AC138932.1-201ENST00000534164 6830 ntBASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 ACTG1P4-201ENST00000425123 1122 ntBASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 MTDHP4-201ENST00000600287 670 ntBASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 AL031008.1-201ENST00000619963 541 ntBASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 AC093525.9-201ENST00000624961 1746 ntBASIC19.88■□□□□ 0.77
PCDHA4Q9UN74 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 AC064862.7-201ENST00000604520 867 ntBASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 AC025062.2-201ENST00000605477 670 ntBASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.87■□□□□ 0.77
PCDHA4Q9UN74 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PCDHA4Q9UN74 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms