Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 FLJ13224-201ENST00000313737 1514 ntBASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CLIP2Q9UDT6 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 RPS2P28-201ENST00000314255 741 ntBASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 AC073592.5-201ENST00000624854 528 ntBASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CLIP2Q9UDT6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 NKTR-203ENST00000442970 646 ntTSL 2 BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 OR7E14P-202ENST00000530490 1290 ntBASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 AC139887.3-201ENST00000568585 713 ntBASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 AC116407.3-201ENST00000623905 1129 ntBASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 AF228730.7-201ENST00000641842 219 ntBASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CLIP2Q9UDT6 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 PCDHA12-202ENST00000613593 2588 ntBASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 AC012317.2-201ENST00000623305 2251 ntBASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 KRT18P55-202ENST00000578578 1546 ntBASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CLIP2Q9UDT6 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms